{"id":"W2948435072","doi":"10.1371/journal.ppat.1007840","title":"Natural Immunity to HIV is associated with Low BLyS/BAFF levels and low frequencies of innate marginal zone like CD1c+ B-cells in the genital tract","year":2019,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre hospitalier de l'Université Laval; Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université Laval; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"B-cell activating factor; Immunology; Innate immune system; Biology; Marginal zone; Immunity; Virology; Antibody; B cell; Immune system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006980976,0.0001630396,0.0001169044,0.0002395087,0.0001439755,0.0002744528,0.00008637016,0.0001872521,0.001991588],"category_scores_gemma":[0.0001486052,0.00009601539,0.00008040412,0.000105731,0.0001972781,0.0001270022,0.0001926203,0.0002639493,0.0001942133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000766618,"about_ca_system_score_gemma":0.00006667868,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003899223,"about_ca_topic_score_gemma":0.0004455307,"domain_scores_codex":[0.9999181,0.00001134958,0.000008476353,0.00002419697,0.0000159779,0.0000219248],"domain_scores_gemma":[0.9999015,0.00001535026,0.00003771525,0.00001008782,0.00001391212,0.00002144902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002838596,0.00004094162,0.0392542,0.00007975937,0.00001376102,0.0002786178,0.000132349,0.00001655832,0.9558485,0.00006108142,0.00004189026,0.003948583],"study_design_scores_gemma":[0.00001279233,0.0007756269,0.7653894,0.00003017055,0.00003796069,0.004251773,0.0006119488,0.0002229966,0.2264928,0.0001786565,0.001986479,0.000009449235],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998943,0.0004514378,0.0001631525,0.000009789206,0.000002166736,0.00000384355,0.00008170772,0.000006342928,0.0003386042],"genre_scores_gemma":[0.9991436,0.0001466928,0.0001258551,0.000008592458,0.000003031671,0.000004516539,0.0001086222,0.000002224704,0.0004568535],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001991588,"threshold_uncertainty_score":0.006662548,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01346163353497229,"score_gpt":0.2241016371369202,"score_spread":0.2106400036019479,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}