{"id":"W2948640047","doi":"10.1080/22221751.2019.1622455","title":"Comparative genomics and genome biology of <i>Campylobacter showae</i>","year":2019,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"US-UK Fulbright Commission; National Institute of Diabetes and Digestive and Kidney Diseases; European Bioinformatics Institute; National Institutes of Health; National Science Foundation","keywords":"Genome; Biology; Comparative genomics; Gene; Genetics; Virulence; Microbiology; Genomics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001223079,0.0002593206,0.0002066282,0.0006903342,0.0003330666,0.0005302643,0.0002711081,0.0004070796,0.001655356],"category_scores_gemma":[0.0003374636,0.0001456453,0.000353352,0.0006091885,0.000264014,0.0003831716,0.0003448405,0.0005499136,0.0004867867],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005088479,"about_ca_system_score_gemma":0.0003670799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00701798,"about_ca_topic_score_gemma":0.005366222,"domain_scores_codex":[0.9998654,0.0000151741,0.000006685277,0.00004351656,0.00002940358,0.00003975877],"domain_scores_gemma":[0.9997837,0.00003823608,0.0000590434,0.00001888053,0.00004780654,0.00005238708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001804568,0.00005312124,0.005834745,0.00007502349,0.00001818079,0.0001186858,0.000198864,0.000163194,0.9867815,0.0005642936,0.0001919268,0.005819954],"study_design_scores_gemma":[0.00003082129,0.0008085961,0.6859624,0.0000788361,0.0001188266,0.002636041,0.002143318,0.002130792,0.2867161,0.00184718,0.01747007,0.00005695076],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9894024,0.001130468,0.002340094,0.0004686256,0.00003083011,0.00002098214,0.002221837,0.00005788727,0.004326861],"genre_scores_gemma":[0.9897963,0.0005452619,0.002451592,0.0001961986,0.00001480706,0.00002046994,0.004974054,0.00003445645,0.001966998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00701798,"threshold_uncertainty_score":0.01395422,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01745871907198891,"score_gpt":0.2470125655751393,"score_spread":0.2295538465031504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}