{"id":"W2948913080","doi":"10.1128/msystems.00102-19","title":"Considering the Other Half of the Gut Microbiome: Bacteriophages","year":2019,"lang":"en","type":"article","venue":"mSystems","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Gut microbiome; Microbiome; Biology; Microbiology; Computational biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001708363,0.00008409921,0.0001142083,0.00001123351,0.00005637843,0.00001509602,0.0002179451,0.00007741978,0.00004606447],"category_scores_gemma":[0.000008382615,0.0000457758,0.00007692694,0.00005044456,0.00006214762,0.00000104736,0.00009028603,0.00005531602,0.00004841769],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007514458,"about_ca_system_score_gemma":0.00005192496,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000346962,"about_ca_topic_score_gemma":0.0001370349,"domain_scores_codex":[0.9994128,0.00007655598,0.0001676032,0.0001465416,0.00004745412,0.0001490642],"domain_scores_gemma":[0.9993729,0.000009657667,0.0001029029,0.000466692,0.00002921898,0.00001862764],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000006213777,0.000008302286,0.005479341,0.00007832808,0.00002167278,1.210992e-7,0.00009478936,0.000003690426,0.9927149,0.00009884758,0.001442097,0.00005173072],"study_design_scores_gemma":[0.0002673188,0.00004351149,0.01128026,0.00006260361,0.000007276469,0.00003502231,0.0001607923,0.000003971602,0.4152651,0.000002576417,0.57279,0.00008160532],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957683,0.0008832638,0.00001050321,0.0007008057,0.0005557234,0.0003147522,0.00002051533,0.000004668614,0.001741452],"genre_scores_gemma":[0.9947937,0.00001218314,0.00002173962,0.000372934,0.0001087357,0.000005160814,0.000004911994,0.00001418915,0.004666489],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5774498,"threshold_uncertainty_score":0.1866683,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006634003284645899,"score_gpt":0.2190773196875717,"score_spread":0.2124433164029258,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}