{"id":"W2949451773","doi":"10.1371/journal.pone.0177977","title":"A dual-strategy expression screen for candidate connectivity labels in the developing thalamus","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Trinity College Dublin; Fonds de Recherche du Québec - Santé; Science Foundation Ireland; Wellcome Trust; Wellcome","keywords":"Protocadherin; Plexin; Biology; Thalamus; Ephrin; Neuroscience; Semaphorin; Erythropoietin-producing hepatocellular (Eph) receptor; Axon guidance; Receptor tyrosine kinase; Proteome; Computational biology; Genetics; Receptor; Cadherin","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003827497,0.000112415,0.0001690849,0.00003369805,0.0006523275,0.0001826786,0.0004373206,0.0000459773,0.00001129918],"category_scores_gemma":[0.001089178,0.00008098966,0.00003123557,0.00006053321,0.00007756527,0.0003090028,0.00009557762,0.0001580776,0.00001359716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002132392,"about_ca_system_score_gemma":0.00005759396,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009081123,"about_ca_topic_score_gemma":0.00008761259,"domain_scores_codex":[0.9988183,0.0001185182,0.0001576105,0.0003264332,0.000288275,0.0002908677],"domain_scores_gemma":[0.9988655,0.0005408032,0.0001491357,0.0003818225,0.00002868472,0.00003409693],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006731446,0.0001848229,0.003483755,0.00003353355,0.000003688666,0.0000319926,0.000186658,0.00000592532,0.993737,0.001693886,0.0000422115,0.000529141],"study_design_scores_gemma":[0.0005412557,0.00008055344,0.01590462,0.0002298198,0.00001005369,0.000003673479,0.0000319328,0.0003986213,0.9806038,0.001956012,0.0001071217,0.0001325325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962523,0.00002556285,0.0002571556,0.001509311,0.00002950214,0.0005095646,0.00002621207,0.00002776667,0.001362623],"genre_scores_gemma":[0.9984722,0.0000430929,0.0003259336,0.000837728,0.0001022116,0.0001068731,0.000001263895,0.0000136019,0.00009716507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01313326,"threshold_uncertainty_score":0.5017242,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2112237970853133,"score_gpt":0.3256846774490486,"score_spread":0.1144608803637353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}