{"id":"W2950460770","doi":"10.1128/mra.00421-19","title":"Complete Genome Sequence of Citrobacter rodentium Strain DBS100","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; University of Calgary","funders":"Canadian Institutes of Health Research; Genome British Columbia; University of British Columbia; Government of Canada","keywords":"Citrobacter rodentium; Citrobacter; Enteropathogenic Escherichia coli; Biology; Whole genome sequencing; Strain (injury); Microbiology; Genome; Escherichia coli; Genetics; Gene; Enterobacteriaceae; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001797945,0.0002016655,0.0002730146,0.00004875249,0.00005892818,0.00001014703,0.0003580514,0.0001441995,0.00009295964],"category_scores_gemma":[0.000008884742,0.0001925286,0.0001094139,0.00006918117,0.0001793929,9.124075e-7,0.0002883213,0.0000800922,0.00008281486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001657177,"about_ca_system_score_gemma":0.00003783165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001149336,"about_ca_topic_score_gemma":0.000007871971,"domain_scores_codex":[0.9987416,0.00007308098,0.0003108705,0.0004554824,0.00005492979,0.0003640955],"domain_scores_gemma":[0.9992375,0.000008871069,0.0001613707,0.0004570149,0.00009193439,0.00004331979],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006769392,0.00004325416,0.0241509,0.00002067566,0.0001760948,0.000001046627,0.0000885071,0.00009899065,0.9746743,0.0000178381,0.0005711781,0.00008949506],"study_design_scores_gemma":[0.0008345285,0.0004885631,0.005172674,0.0000123415,0.00002319978,0.00002651843,0.0001552927,0.000005122527,0.01536644,0.00002362813,0.9776204,0.0002712671],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9910232,0.0007119494,0.00004761736,0.00007215931,0.0001978349,0.0002893529,0.005883842,0.000003644965,0.001770442],"genre_scores_gemma":[0.9900118,0.00009414102,0.000318683,0.0006172842,0.0000986233,0.000012422,0.005434666,0.00002314733,0.003389208],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9770492,"threshold_uncertainty_score":0.7851087,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01600508753402774,"score_gpt":0.229092072454479,"score_spread":0.2130869849204513,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}