{"id":"W2950558056","doi":"10.1186/s12862-017-0965-4","title":"The impact of migratory flyways on the spread of avian influenza virus in North America","year":2017,"lang":"en","type":"article","venue":"BMC Evolutionary Biology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Health and Medical Research Council; Australian Research Council; Medical Research Council","keywords":"Biological dispersal; Biology; Phylogeography; Evolutionary biology; Avian influenza virus; Range (aeronautics); Bird migration; Ecology; Transmission (telecommunications); Influenza A virus subtype H5N1; Geography; Phylogenetic tree; Virus; Population; Virology; Gene; Demography; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003701366,0.0001525015,0.000353002,0.000118221,0.0003914456,0.000004827294,0.0004551079,0.00008955608,0.00004520669],"category_scores_gemma":[0.002460753,0.00007340681,0.0001891626,0.0001455887,0.002019513,0.00004526134,0.0002214626,0.0002907344,0.00005426546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001514341,"about_ca_system_score_gemma":0.0004002571,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004108914,"about_ca_topic_score_gemma":0.002060384,"domain_scores_codex":[0.99862,0.0002601858,0.0003731873,0.0001981669,0.0001858931,0.000362555],"domain_scores_gemma":[0.9976131,0.0008962649,0.0003028833,0.0009249662,0.0002060411,0.00005675142],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001204386,0.0001485523,0.9874039,0.00002039456,0.0001347823,0.000003421657,0.0002140154,0.00008798984,0.00662972,0.0008132005,0.002233493,0.001106141],"study_design_scores_gemma":[0.0006414706,0.0009287853,0.9921117,0.00003758738,0.00001224304,0.000003435325,0.0001300741,0.0001776811,0.0004376619,0.0003260043,0.005126798,0.00006659621],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99361,0.002751189,0.000007954822,0.0003487791,0.00006119075,0.0004469979,0.0001604973,0.00001037853,0.002603007],"genre_scores_gemma":[0.9991335,0.0004073452,0.00007133072,0.0001720963,0.00007886186,0.00005604823,0.000009740367,0.000009576345,0.0000614786],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006192058,"threshold_uncertainty_score":0.7440978,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09701465748374302,"score_gpt":0.4024303862769099,"score_spread":0.3054157287931668,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}