{"id":"W2951112565","doi":"10.1186/s12864-017-4339-5","title":"Characteristics of functional enrichment and gene expression level of human putative transcriptional target genes","year":2018,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Core Research for Evolutional Science and Technology; Institute of Genetics; University of Tokyo; Japan Agency for Medical Research and Development","keywords":"Biology; Gene; Enhancer; Genetics; Transcriptional regulation; Promoter; Gene expression; DNA microarray; Regulation of gene expression; CTCF; Computational biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003481184,0.0002281296,0.0002479389,0.001006659,0.0001827631,0.0002990864,0.0001560258,0.0002996726,0.001773958],"category_scores_gemma":[0.0006122313,0.0001164922,0.0002915134,0.0009156378,0.0001953732,0.0001933824,0.0001841503,0.0002194965,0.0005740862],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002186907,"about_ca_system_score_gemma":0.0001293529,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003808345,"about_ca_topic_score_gemma":0.000282165,"domain_scores_codex":[0.9996611,0.00003002127,0.0000256774,0.0001386296,0.0000851855,0.00005948245],"domain_scores_gemma":[0.9993261,0.0002622416,0.000146722,0.00003911133,0.000134487,0.0000912554],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007220733,0.00004672907,0.06525644,0.0002300266,0.00005571268,0.0002254604,0.00008420824,0.00069488,0.920925,0.0001861004,0.0001750192,0.01139847],"study_design_scores_gemma":[0.0000190529,0.0003129194,0.6513796,0.00002096291,0.0001231385,0.001996428,0.000152647,0.003605497,0.338694,0.0004930763,0.003171892,0.0000307045],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9860459,0.001553648,0.008075352,0.00005664576,0.000009868334,0.00002057256,0.002618494,0.0001328685,0.001486557],"genre_scores_gemma":[0.9894463,0.0003828632,0.004459456,0.00004223086,0.00001291539,0.00005788608,0.004564756,0.0000377584,0.0009958612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001773958,"threshold_uncertainty_score":0.005934477,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03447241590071637,"score_gpt":0.2515992500177848,"score_spread":0.2171268341170685,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}