{"id":"W2951292100","doi":"10.1093/molbev/msw283","title":"Archaic adaptive introgression in <i>TBX15/WARS2</i>","year":2016,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":119,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Human Genome Research Institute; University of California Merced; Israel Science Foundation; Lundbeckfonden; National Institutes of Health; National Science Foundation","keywords":"Biology; Introgression; Evolutionary biology; Adaptive evolution; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001554597,0.0001303963,0.0001210336,0.00006607497,0.0000501934,0.000004137291,0.00008602676,0.0002449259,0.000005563674],"category_scores_gemma":[0.00004951131,0.00009421499,0.00004600353,0.00006555027,0.0001936268,0.000003986488,0.00006121673,0.00007118255,0.00000673105],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002512203,"about_ca_system_score_gemma":0.00003411099,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003954568,"about_ca_topic_score_gemma":0.0000749423,"domain_scores_codex":[0.9990724,0.0001227794,0.000151681,0.0003440164,0.0000415911,0.0002675284],"domain_scores_gemma":[0.9996979,0.00001080403,0.00003998484,0.0001595438,0.0000311439,0.00006061898],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002078692,0.00003865987,0.05004073,0.00000347273,0.00001380924,0.000004143234,0.00001253482,0.000003892956,0.9400326,0.002073229,0.00004425402,0.007524795],"study_design_scores_gemma":[0.004762671,0.00210172,0.1063784,0.0001674283,0.00003607425,0.00007114482,0.00006165862,0.0002413981,0.8571469,0.02074255,0.007486598,0.0008035529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.895947,0.001852713,0.1014096,0.0003265175,0.0001318195,0.0001079197,0.00001106506,0.00001170624,0.0002015858],"genre_scores_gemma":[0.9987459,0.0001962209,0.0006648042,0.0001804203,0.00007698531,0.00001658257,0.00003260431,0.00001187403,0.00007465645],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1027988,"threshold_uncertainty_score":0.3841976,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006314261214232168,"score_gpt":0.2378338254047143,"score_spread":0.2315195641904821,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}