{"id":"W2951360045","doi":"10.82308/33745","title":"Characterization of TOPHAT, a novel domesticated transposable element gene","year":2015,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Biology; Transposable element; Genetics; Gene; Genome; Insertional mutagenesis; Transposon mutagenesis; Functional genomics; Genomics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001116096,0.0005697719,0.0003422243,0.0005261001,0.0001698285,0.0004840899,0.0003455645,0.0003597891,0.0008336921],"category_scores_gemma":[0.0002068415,0.0001650859,0.0004638678,0.0003479714,0.0002593758,0.0002734634,0.0002430168,0.0006123909,0.0007963254],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002056479,"about_ca_system_score_gemma":0.0002383703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005160877,"about_ca_topic_score_gemma":0.0005855715,"domain_scores_codex":[0.9998753,0.000007525413,0.000009971092,0.0000370096,0.00005046061,0.00001976056],"domain_scores_gemma":[0.9997781,0.00004035098,0.00003882711,0.00001757193,0.00004571624,0.00007942696],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003673167,0.00001677345,0.0006054082,0.00006123185,0.00001306418,0.000373552,0.00001508991,0.00008999393,0.9954869,0.0001262156,0.00006449314,0.003110502],"study_design_scores_gemma":[0.00003583199,0.0005433316,0.0409891,0.00003571756,0.0001415011,0.006052415,0.0001441871,0.002931211,0.9118052,0.0003182622,0.0369498,0.0000533722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9490311,0.003873543,0.03292444,0.0003725729,0.0002174521,0.000220265,0.008333094,0.0003088897,0.004718663],"genre_scores_gemma":[0.9318134,0.003808035,0.02353057,0.0003343587,0.0001004994,0.0001067308,0.02807348,0.0002251753,0.01200776],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008336921,"threshold_uncertainty_score":0.002788961,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03169149423263794,"score_gpt":0.2147890702232684,"score_spread":0.1830975759906305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}