{"id":"W2951432822","doi":"10.1021/acssynbio.8b00158","title":"Creation and Characterization of a Genomically Hybrid Strain in the Nitrogen-Fixing Symbiotic Bacterium <i>Sinorhizobium meliloti</i>","year":2018,"lang":"en","type":"article","venue":"ACS Synthetic Biology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Fondazione Umberto Veronesi; Università degli Studi di Firenze; Deutsche Forschungsgemeinschaft","keywords":"Replicon; Sinorhizobium meliloti; Biology; Genome; Strain (injury); Genetics; In silico; Synthetic biology; Gene; Nitrogen fixation; Phenotype; Computational biology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004183025,0.0004981032,0.0003537256,0.0003699656,0.0002247481,0.0003932298,0.0005071517,0.000448797,0.00057483],"category_scores_gemma":[0.0003967539,0.0002178471,0.0004335536,0.0003513912,0.0002607054,0.0001989969,0.0007199782,0.0006200954,0.0005222054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002596063,"about_ca_system_score_gemma":0.0002943004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001253754,"about_ca_topic_score_gemma":0.001691527,"domain_scores_codex":[0.9996012,0.00008647756,0.00005437671,0.00009109129,0.0001165278,0.00005040162],"domain_scores_gemma":[0.9996506,0.00007674855,0.00009439171,0.00007696125,0.00003799836,0.00006324119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003971305,0.00003995146,0.0002830467,0.00002174521,0.000006773309,0.00005288893,0.00002387167,0.00007926904,0.9985176,0.00006016041,0.00001176154,0.0008631951],"study_design_scores_gemma":[0.00002542393,0.0004893462,0.008169163,0.00000916209,0.00005200806,0.0005244248,0.0001233037,0.00149718,0.9865247,0.00005153029,0.002510869,0.00002292069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9841223,0.0002336972,0.0125938,0.0001491671,0.00002899481,0.0002057813,0.00143609,0.000153057,0.001077142],"genre_scores_gemma":[0.9619067,0.000362617,0.02971555,0.00005930624,0.00001258602,0.0001872876,0.005513649,0.0001491754,0.002092983],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001253754,"threshold_uncertainty_score":0.002492845,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01050995466374509,"score_gpt":0.2111957541137534,"score_spread":0.2006857994500083,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}