{"id":"W2951685627","doi":"10.1093/gigascience/gix042","title":"Kronos: a workflow assembler for genome analytics and informatics","year":2017,"lang":"en","type":"article","venue":"GigaScience","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; BC Cancer Agency; Simon Fraser University; University of British Columbia; Ontario Institute for Cancer Research; University of British Columbia Hospital","funders":"Terry Fox Research Institute; Genome British Columbia; Science and Engineering Research Council; Genome Canada","keywords":"Computer science; Workflow; Python (programming language); Modular design; Software engineering; Executable; Cloud computing; Programming language; Operating system; Database","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005052979,0.002858837,0.001109691,0.002602451,0.001344894,0.002544752,0.003075814,0.001043703,0.01856968],"category_scores_gemma":[0.008149216,0.002322566,0.002681705,0.001505185,0.001479808,0.002846155,0.004647811,0.004791964,0.02181107],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009787659,"about_ca_system_score_gemma":0.004113344,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002782592,"about_ca_topic_score_gemma":0.002271642,"domain_scores_codex":[0.9974089,0.0004217332,0.0003930835,0.0006168687,0.0009118041,0.0002475756],"domain_scores_gemma":[0.9963161,0.001102124,0.0005381564,0.0008491933,0.0006748188,0.0005195232],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003380318,0.0005373717,0.005718852,0.002841157,0.000554055,0.001503526,0.001352585,0.02897657,0.1244723,0.03751805,0.4842674,0.3088779],"study_design_scores_gemma":[0.0007176623,0.0004511918,0.004317661,0.0005795208,0.0001923743,0.001375386,0.0002647694,0.136149,0.1336581,0.05878333,0.6628396,0.000671454],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.004000312,0.00028451,0.5459,0.0003118444,0.000406006,0.0004696953,0.01003239,0.4337687,0.004826526],"genre_scores_gemma":[0.04012683,0.0008774642,0.7297072,0.0009319736,0.0002306688,0.002414447,0.07342305,0.1429643,0.009323969],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.01856968,"threshold_uncertainty_score":0.06212175,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02344197264771384,"score_gpt":0.2723642364955647,"score_spread":0.2489222638478508,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}