{"id":"W2952358323","doi":"10.1093/gbe/evy201","title":"The Grayling Genome Reveals Selection on Gene Expression Regulation after Whole-Genome Duplication","year":2018,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Norges Forskningsråd; Universitetet i Oslo; National Science Council; Norwegian Sequencing Centre; McGill University","keywords":"Biology; Gene duplication; Genome; Grayling; Gene; Genetics; Selection (genetic algorithm); Computational biology; Gene expression; Regulation of gene expression; Evolutionary biology; Fish <Actinopterygii>; Fishery","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001168439,0.000227925,0.000326255,0.0004381412,0.0002225315,0.0003684428,0.00012539,0.0002225729,0.001030991],"category_scores_gemma":[0.0001874216,0.0001723269,0.0003656306,0.0006092071,0.0001710965,0.0001501377,0.0003658231,0.000394875,0.0004253591],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002705135,"about_ca_system_score_gemma":0.0003246862,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002773361,"about_ca_topic_score_gemma":0.005751255,"domain_scores_codex":[0.9999027,0.000004851228,0.0000046065,0.00005668857,0.00001578055,0.0000153515],"domain_scores_gemma":[0.999915,0.00001807599,0.00002545464,0.0000109488,0.00001245168,0.00001802568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003553217,0.00001386568,0.03059815,0.000252075,0.0001072188,0.0006351406,0.0004536294,0.000733409,0.9485531,0.0007203768,0.000703901,0.01687388],"study_design_scores_gemma":[0.00003167315,0.0001359107,0.9315901,0.00004783922,0.0002254892,0.001050064,0.0003172351,0.003152418,0.04093588,0.001282422,0.02118459,0.0000462948],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99065,0.001233956,0.002573989,0.00007862713,0.00001302609,0.000005211381,0.00354729,0.000306027,0.001591966],"genre_scores_gemma":[0.9798732,0.0007410933,0.005145066,0.000234071,0.00001384525,0.00001771246,0.01181909,0.0002053176,0.001950476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002773361,"threshold_uncertainty_score":0.005514383,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005507323533176581,"score_gpt":0.2596455190179773,"score_spread":0.2541381954848007,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}