{"id":"W2952445679","doi":"10.14745/ccdr.v45i06a04","title":"Increase in ST-11 serogroup W Neisseria meningitidis invasive meningococcal disease in Canada, 2016–2018","year":2019,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Yukon Health and Social Services; Government of Prince Edward Island; Government of New Brunswick; Public Health Ontario; Dalhousie University; University of Toronto; Saskatchewan Disease Control Laboratory; Provincial Laboratory of Public Health; BC Mental Health & Substance Use Services; Memorial University of Newfoundland; Nova Scotia Health Authority; Public Health Agency of Canada","funders":"European Commission; University of Oxford; Public Health Agency; Public Health Agency of Canada; Wellcome Trust","keywords":"Neisseria meningitidis; Serotype; Meningococcal disease; Multilocus sequence typing; Biology; Neisseria; Veterinary medicine; Medicine; Demography; Microbiology; Genotype; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003039885,0.0003415077,0.0005819642,0.0001457229,0.0001843965,0.00003252426,0.0005017935,0.0001029457,0.00159646],"category_scores_gemma":[0.000337353,0.0003485805,0.00008673791,0.0003630967,0.00006431247,0.0002226544,0.0003723707,0.0004159524,0.00002093761],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001607349,"about_ca_system_score_gemma":0.01853982,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9992621,"about_ca_topic_score_gemma":0.9998214,"domain_scores_codex":[0.9975697,0.0003889762,0.0007866582,0.0004915844,0.00006491659,0.000698162],"domain_scores_gemma":[0.9975006,0.0002450852,0.000262458,0.001546945,0.0001036292,0.000341257],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004159084,0.0001666343,0.9800828,0.00006985386,0.0000816248,0.000784136,0.00002813109,0.0002204865,0.004904526,0.0001268572,0.01300401,0.0001149969],"study_design_scores_gemma":[0.001927895,0.00002785792,0.8396404,0.0002867981,0.00006762421,0.00009713975,0.0004680669,0.00004377577,0.0003911389,0.00005059589,0.1564329,0.0005658406],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994463,0.002194128,6.275181e-7,0.0005688473,0.0009992525,0.0005816373,0.0003593343,0.00003147945,0.0008016815],"genre_scores_gemma":[0.9960628,0.0001176707,0.00001000547,0.0002366747,0.00002460897,0.0001415986,0.001412597,0.00003816142,0.001955903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1434289,"threshold_uncertainty_score":0.9998966,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009140306762370952,"score_gpt":0.2133537753540494,"score_spread":0.2042134685916785,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}