{"id":"W2952504636","doi":"10.1128/mbio.01861-17","title":"The Complex Quorum Sensing Circuitry of <i>Burkholderia thailandensis</i> Is Both Hierarchically and Homeostatically Organized","year":2017,"lang":"en","type":"article","venue":"mBio","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Government of Canada","keywords":"Quorum sensing; Homoserine; Burkholderia; Biology; Gene; Transcription (linguistics); Bacteria; Genetics; Cell biology; Chemistry; Microbiology; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002294003,0.0001551731,0.0002141547,0.00001385959,0.0006166058,0.0002038443,0.0002145807,0.0001359477,0.00001386483],"category_scores_gemma":[0.0001755468,0.0001144345,0.00006630508,0.00002397055,0.000484678,0.000005270494,0.0002628849,0.00009686316,0.000003460051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004300678,"about_ca_system_score_gemma":0.0000572337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006665321,"about_ca_topic_score_gemma":0.00008238177,"domain_scores_codex":[0.9990044,0.00005519065,0.0002436634,0.0002906885,0.0001181825,0.0002878308],"domain_scores_gemma":[0.9989243,0.00003435013,0.0001855678,0.0006749447,0.00008966518,0.00009115881],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009155949,0.00001241846,0.0009778432,0.00001246005,0.00005063977,0.000003908422,0.00006104927,4.559842e-8,0.989712,0.0001569269,0.002335807,0.006585333],"study_design_scores_gemma":[0.001577389,0.0002752288,0.0782003,0.00005065011,0.00005428314,0.00009083614,0.0001387345,0.00008932237,0.8563479,0.0004029522,0.06237732,0.0003951018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951872,0.0001794448,0.0001331819,0.00272091,0.0002136952,0.0001260637,0.0000343249,0.000009542423,0.001395675],"genre_scores_gemma":[0.9971357,0.0002352952,0.001353908,0.0007309485,0.0001607128,4.187232e-7,0.00002767303,0.00002389935,0.0003314422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1333641,"threshold_uncertainty_score":0.4742495,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01534696173240505,"score_gpt":0.2492911746468145,"score_spread":0.2339442129144094,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}