{"id":"W2952863004","doi":"10.82308/32969","title":"The role of horizontal gene transfer in mycobacterial pathogenesis","year":2016,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Génome Québec; McGill University; Commonwealth Scientific and Industrial Research Organisation; Harvard University","keywords":"Biology; Horizontal gene transfer; Genetics; Genome; Gene; Comparative genomics; Locus (genetics); Transposable element; Genomic island; Transposon mutagenesis; Genomics; Virulence","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001365864,0.0002454766,0.000139372,0.0002162276,0.0002559459,0.0006361364,0.0002061943,0.000473552,0.0005989234],"category_scores_gemma":[0.0001682241,0.0001209429,0.0001570441,0.0001527268,0.0003411722,0.0003638366,0.0003926397,0.0003713166,0.0001605749],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000249504,"about_ca_system_score_gemma":0.0003384356,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004125393,"about_ca_topic_score_gemma":0.0003811507,"domain_scores_codex":[0.9998878,0.00001298702,0.000004317078,0.00002610428,0.00003514534,0.00003357279],"domain_scores_gemma":[0.999917,0.00002144702,0.0000278646,0.000006864444,0.0000108344,0.00001592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002141816,0.0001110008,0.01921979,0.0004121582,0.00002519474,0.0008080786,0.0005407737,0.0005910581,0.9167432,0.005443428,0.0001896931,0.05570141],"study_design_scores_gemma":[0.00007430671,0.001681706,0.2243848,0.0003738359,0.0001929188,0.002705005,0.00259551,0.006857972,0.7209958,0.01253934,0.02754553,0.00005310481],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.9768087,0.01511546,0.004178545,0.0004603491,0.00003805472,0.00003284504,0.00006413352,0.00004130777,0.003260636],"genre_scores_gemma":[0.9901287,0.006758191,0.001593208,0.00005395956,0.00001773864,0.00001399626,0.00003947815,0.000003409614,0.001391207],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.0006361364,"threshold_uncertainty_score":0.00200367,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.011999664906527,"score_gpt":0.2302706367762046,"score_spread":0.2182709718696776,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}