{"id":"W2952994334","doi":"10.2196/11553","title":"Diet-Induced Alteration of Microbiota and Development of Obesity, Nonalcoholic Fatty Liver Disease, and Diabetes: Study Protocol of a Prospective Study","year":2019,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Gut flora; Internal medicine; Medicine; Gastroenterology; Nonalcoholic fatty liver disease; Type 2 diabetes; Obesity; Fatty liver; Prospective cohort study; Diabetes mellitus; Weight loss; Physiology; Disease; Endocrinology; Immunology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02128007,0.003828308,0.005081746,0.002155413,0.004542272,0.001591365,0.002634236,0.003761071,0.01458007],"category_scores_gemma":[0.01148927,0.002453844,0.002681687,0.003141922,0.002735897,0.001506661,0.002301082,0.002561477,0.003945315],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002751283,"about_ca_system_score_gemma":0.01451338,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002571506,"about_ca_topic_score_gemma":0.003824353,"domain_scores_codex":[0.9887339,0.005547137,0.001947369,0.001582908,0.00114963,0.001038992],"domain_scores_gemma":[0.9889486,0.001403498,0.001751394,0.002580894,0.003359238,0.001956459],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"observational","study_design_scores_codex":[0.7071653,0.1045027,0.09297927,0.009191203,0.00263812,0.001918292,0.00170956,0.004154572,0.01565737,0.003234728,0.009571983,0.04727693],"study_design_scores_gemma":[0.3714192,0.3006539,0.2282889,0.003556371,0.00237948,0.0009762535,0.001483383,0.00374055,0.005298733,0.002920324,0.07884084,0.0004420555],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"protocol","genre_gemma":"protocol","genre_scores_codex":[0.0375051,0.0005607673,0.004735858,0.0001494896,0.0002379508,0.9522569,0.00300904,0.00006642189,0.001478492],"genre_scores_gemma":[0.01800334,0.0003030121,0.006077765,0.0002412804,0.00008873952,0.9734678,0.001247327,0.00001228723,0.0005584002],"genre_candidate":"protocol","genre_consensus":"protocol","teacher_disagreement_score":0.02128007,"threshold_uncertainty_score":0.1125411,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1112228056837108,"score_gpt":0.4740706696298213,"score_spread":0.3628478639461105,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}