{"id":"W2953046607","doi":"10.1371/journal.pgen.1007949","title":"Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)","year":2019,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Natural Sciences and Engineering Research Council of Canada; Vetenskapsrådet","keywords":"Biology; Selfing; Outcrossing; Ploidy; Evolutionary biology; Polyploid; Population; Genetics; Selection (genetic algorithm); Gene; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006847364,0.0001334204,0.000128621,0.00002350863,0.0001240146,0.00001578566,0.0004344177,0.000122332,0.00001733804],"category_scores_gemma":[0.00002332388,0.00007514113,0.0001295027,0.0001973173,0.0002625618,0.00000358285,0.000244312,0.0001159821,0.000001088568],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001081861,"about_ca_system_score_gemma":0.00008036015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003817186,"about_ca_topic_score_gemma":0.00009196122,"domain_scores_codex":[0.999113,0.000101483,0.0001869152,0.0002003265,0.0002538364,0.0001443973],"domain_scores_gemma":[0.9991187,0.0000162245,0.0001825673,0.0005362323,0.0001095003,0.00003670837],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000167536,0.00001982869,0.5463696,0.00002209227,0.00006518987,3.404285e-8,0.0002333951,0.0005970808,0.4522696,0.0001080813,0.0001374211,0.0001609643],"study_design_scores_gemma":[0.0004887918,0.0001150304,0.5420959,0.000022533,0.0001267881,0.000006165788,0.0006967239,0.0001037146,0.4520027,0.0002757933,0.003928859,0.0001369826],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963452,0.002569032,0.0000171582,0.0001677096,0.0002818002,0.0003329577,0.00005908923,0.000003103045,0.0002239718],"genre_scores_gemma":[0.9994308,0.0001122138,0.0001023374,0.00008248606,0.00007129929,0.000002418836,0.000008918764,0.0000097599,0.000179747],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004273716,"threshold_uncertainty_score":0.3064166,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004916472370210809,"score_gpt":0.1977084910226206,"score_spread":0.1927920186524098,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}