{"id":"W2953094151","doi":"10.1101/026021","title":"Evolutionary quantitative genomics of <i>Populus trichocarpa</i>","year":2015,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria; University of British Columbia","funders":"Genome British Columbia; Genome Canada","keywords":"Populus trichocarpa; Genomics; Biology; Computational biology; Evolutionary biology; Genome; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001917344,0.0001694754,0.0001137912,0.0003143996,0.0001468453,0.0002049985,0.0001288726,0.0001035802,0.0006150883],"category_scores_gemma":[0.0002347306,0.00006346316,0.0001486893,0.0002533698,0.0001454201,0.00008257901,0.0001395029,0.0001724637,0.00007710279],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001821989,"about_ca_system_score_gemma":0.0001185782,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002393598,"about_ca_topic_score_gemma":0.002945123,"domain_scores_codex":[0.9999259,0.00001586557,0.000003888108,0.00002614995,0.00001630289,0.00001180618],"domain_scores_gemma":[0.9998006,0.00005813803,0.00006902679,0.00001375411,0.00003083827,0.00002759586],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000163945,0.00002342918,0.0565186,0.00004344368,0.00006552765,0.0001015135,0.0001567715,0.0005716244,0.9357697,0.0001841221,0.00007191982,0.006329497],"study_design_scores_gemma":[0.000005900071,0.00008817088,0.97041,0.000004722277,0.00003264193,0.0002306437,0.0001271652,0.002215063,0.02618842,0.0001601537,0.0005293609,0.000007754965],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989834,0.00002968235,0.0005840351,0.00001448049,5.685714e-7,0.000002444991,0.0001756818,0.00001599518,0.0001935918],"genre_scores_gemma":[0.9989901,0.00002633154,0.0005405708,0.00001105858,0.000001385055,0.000005463152,0.0002811029,0.000008127801,0.0001357234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002393598,"threshold_uncertainty_score":0.004759371,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01939924688180908,"score_gpt":0.2391100408236951,"score_spread":0.219710793941886,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}