{"id":"W2953290498","doi":"10.1101/420794","title":"Sfp1 regulates transcriptional networks driving cell growth and division through multiple promoter binding modes","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics and Genomics of Geneva; Institute of Genetics; Canton de Genève","keywords":"Ribosome biogenesis; Chromatin immunoprecipitation; Promoter; Biology; Transcription factor; Cell biology; Regulon; Cell cycle; Cell division; Gene; Chromatin; Genetics; Gene expression; Cell; Ribosome; RNA","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002085402,0.0003470732,0.0003032728,0.0002807983,0.0002822431,0.0004306082,0.0002149759,0.0002687979,0.001731912],"category_scores_gemma":[0.000236761,0.0002565117,0.0002454591,0.0001768365,0.000381839,0.000296626,0.0003175272,0.0004355924,0.000704059],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006835239,"about_ca_system_score_gemma":0.0002513387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008976001,"about_ca_topic_score_gemma":0.001396071,"domain_scores_codex":[0.9998665,0.00001099661,0.000004936184,0.00005605416,0.00003778719,0.00002381481],"domain_scores_gemma":[0.9998343,0.0000434811,0.00003789221,0.00001972024,0.00002312448,0.00004142646],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008352629,0.000009532495,0.001585417,0.00002675464,0.000003059808,0.00004257095,0.00002416085,0.0003385471,0.9949302,0.0003254916,0.0001388259,0.002491936],"study_design_scores_gemma":[0.00003159242,0.00006339829,0.02157141,0.00001206923,0.000007174775,0.0002424615,0.00006953371,0.01302057,0.9615688,0.001068368,0.002333464,0.00001107083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836374,0.0009998525,0.01247243,0.0002293809,0.00002598918,0.00001230557,0.0005569507,0.000400044,0.001665538],"genre_scores_gemma":[0.9941139,0.0002276332,0.003699011,0.00003396181,0.00001496148,0.00001052622,0.0005410253,0.00004694427,0.001312133],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001731912,"threshold_uncertainty_score":0.00579381,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007611122263794684,"score_gpt":0.1930496830932968,"score_spread":0.1854385608295021,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}