{"id":"W2953380509","doi":"10.1128/iai.00573-18","title":"Evolution and Sequence Diversity of FhuA in Salmonella and Escherichia","year":2018,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Escherichia coli; Enterobacteriaceae; Microbiology; Phylogenetic tree; Salmonella; Genetics; Horizontal gene transfer; Pathogenicity island; Phylogenetics; Peptide sequence; Serotype; Gene; Sequence analysis; Colicin; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003248825,0.0002469226,0.0002185848,0.001610137,0.0002585435,0.0004309763,0.0002612404,0.0004943829,0.0003861834],"category_scores_gemma":[0.0006214838,0.00022871,0.0002613572,0.0008350035,0.0003498234,0.0001906402,0.0005007691,0.0003105261,0.0002935964],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000437024,"about_ca_system_score_gemma":0.0002837126,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003121959,"about_ca_topic_score_gemma":0.003360879,"domain_scores_codex":[0.9997551,0.00005022215,0.00002124691,0.0000606493,0.00005579949,0.0000570346],"domain_scores_gemma":[0.9995685,0.00007735373,0.00009816934,0.00004044811,0.0001063584,0.0001091295],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008530712,0.0001361597,0.06186191,0.0001212487,0.00009192189,0.000504911,0.001146796,0.0006051884,0.9039828,0.000583406,0.0001390352,0.02997359],"study_design_scores_gemma":[0.00005481429,0.0006890685,0.9515624,0.00009956436,0.0001065162,0.002554234,0.001432611,0.001853638,0.03289755,0.0004646156,0.008215862,0.00006918571],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984887,0.0004451833,0.0002565344,0.00003905233,0.000005043767,0.000006470276,0.0001294932,0.000006001058,0.0006235375],"genre_scores_gemma":[0.9980991,0.0003144717,0.0004508579,0.0000624844,0.000006947194,0.000008218602,0.0005392146,0.000008561346,0.000510236],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003121959,"threshold_uncertainty_score":0.006207585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01316103061106979,"score_gpt":0.2347297465195096,"score_spread":0.2215687159084398,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}