{"id":"W2953425554","doi":"10.1016/j.ympev.2019.106552","title":"Cryptic species and independent origins of allochronic populations within a seabird species complex (Hydrobates spp.)","year":2019,"lang":"en","type":"article","venue":"Molecular Phylogenetics and Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Fish and Wildlife Service; Ontario Trillium Foundation","keywords":"Biology; Species complex; Sympatric speciation; Ecology; Range (aeronautics); Reproductive isolation; Population; Monophyly; Biodiversity; Zoology; Evolutionary biology; Phylogenetics; Clade; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008637104,0.0001709437,0.0001811951,0.00007678891,0.00008995704,0.00003106353,0.0001035164,0.000148501,0.00006522596],"category_scores_gemma":[0.00001638262,0.0001771911,0.00006106365,0.00009839775,0.0001465,0.000004520064,0.0001556723,0.00006778081,0.000006868091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000339927,"about_ca_system_score_gemma":0.00004446145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005955241,"about_ca_topic_score_gemma":0.00007605064,"domain_scores_codex":[0.9990188,0.00005097049,0.0002279561,0.0003243319,0.0001939501,0.0001839258],"domain_scores_gemma":[0.9994362,0.000004599016,0.0001236548,0.0002584273,0.00009767179,0.0000794489],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003028721,0.00002276116,0.1627378,0.00004727912,0.00005041795,0.00000109924,0.0000752087,0.007262664,0.8178063,0.01184278,0.00006466566,0.0000587597],"study_design_scores_gemma":[0.0007617049,0.0003926226,0.936398,0.00001989869,0.00007625112,0.00002291852,0.000214905,0.002059611,0.05262075,0.002123555,0.005011011,0.0002988356],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941955,0.001263027,0.003582939,0.00007020775,0.0001404828,0.000234367,0.00004479822,0.000007402097,0.0004612563],"genre_scores_gemma":[0.9968352,0.0001500188,0.002374795,0.00005602977,0.00004789793,0.0000025159,0.0001535413,0.00001472923,0.0003652818],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7736602,"threshold_uncertainty_score":0.7225646,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01670838076957059,"score_gpt":0.2252419085401923,"score_spread":0.2085335277706217,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}