{"id":"W2953682861","doi":"10.1101/685685","title":"Classic and introgressed selective sweeps shape mimicry loci across a butterfly adaptive radiation","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Lepidoptera: Biology and Taxonomy","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"FP7 Ideas: European Research Council; Science and Technology Facilities Council; Natural Environment Research Council; Engineering and Physical Sciences Research Council; Medical Research Council; Dell EMC; Universidad del Rosario; Isaac Newton Trust; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Austrian Science Fund; Agence Nationale de la Recherche; National Science Foundation; University of Cambridge; Sight Research UK; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Heliconius; Mimicry; Biology; Adaptive radiation; Müllerian mimicry; Evolutionary biology; Introgression; Natural selection; Selection (genetic algorithm); Selective sweep; Adaptation (eye); Coevolution; Aposematism; Butterfly; Predation; Genetics; Phylogenetics; Ecology; Gene; Allele; Artificial intelligence; Predator; Haplotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002704154,0.0001481971,0.0002036272,0.0004076464,0.0001886172,0.0003970821,0.000154084,0.000240288,0.001774581],"category_scores_gemma":[0.000594161,0.0001023554,0.0002199148,0.00035819,0.0003988523,0.0001842706,0.0003420959,0.0002791335,0.0001172796],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002452016,"about_ca_system_score_gemma":0.00007449198,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001112218,"about_ca_topic_score_gemma":0.002131299,"domain_scores_codex":[0.9999068,0.00002383909,0.000005068379,0.00003160191,0.00001663345,0.00001597967],"domain_scores_gemma":[0.9997464,0.0001050527,0.00004964101,0.00003609119,0.0000187438,0.00004402062],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000770781,0.00009980551,0.403778,0.0001358926,0.0004671912,0.0005430874,0.0007903703,0.02058865,0.5453039,0.001804477,0.0005273391,0.0251906],"study_design_scores_gemma":[0.00005596826,0.0001539345,0.9523574,0.00001087614,0.00008204353,0.0003370785,0.000357769,0.03530004,0.009581991,0.001155785,0.0005839071,0.00002332984],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992902,0.00002012909,0.0003678552,0.00001026981,7.607818e-7,0.000001126716,0.000041159,0.00001630075,0.0002523347],"genre_scores_gemma":[0.9995739,0.00001353684,0.0002535329,0.0000111853,0.000001550481,0.000001825325,0.00006884601,0.000007381701,0.0000683313],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001774581,"threshold_uncertainty_score":0.005936563,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01067006581663308,"score_gpt":0.2226156686246208,"score_spread":0.2119456028079877,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}