{"id":"W2954311437","doi":"10.1292/jvms.19-0228","title":"Aerotolerance and multilocus sequence typing among &lt;i&gt;Campylobacter jejuni&lt;/i&gt; strains isolated from humans, broiler chickens, and cattle in Miyazaki Prefecture, Japan","year":2019,"lang":"en","type":"article","venue":"Journal of Veterinary Medical Science","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Multilocus sequence typing; Campylobacter jejuni; Biology; Campylobacter; Microbiology; Typing; Broiler; Phylogenetic tree; Campylobacter coli; Veterinary medicine; Bacteria; Genetics; Genotype; Gene; Food science; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001762089,0.0002532222,0.0005357764,0.00006642249,0.000183176,0.0001001521,0.0007530813,0.0002574144,0.0004712868],"category_scores_gemma":[0.0004432753,0.000113818,0.00008127477,0.0005001025,0.001042463,0.0008071279,0.0002652562,0.0005434579,0.00001120386],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006963949,"about_ca_system_score_gemma":0.00007003637,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00015861,"about_ca_topic_score_gemma":0.0004276497,"domain_scores_codex":[0.9972752,0.0002729732,0.0006764776,0.0005606517,0.0006284765,0.0005862626],"domain_scores_gemma":[0.9983857,0.0004648087,0.000372595,0.0001227555,0.0001111444,0.0005429708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001363496,0.0001090044,0.1384867,0.00001615697,0.00001391336,0.00008942436,0.0003980513,0.000008864337,0.8323447,0.00007417513,0.00004303763,0.02827957],"study_design_scores_gemma":[0.0005378324,0.001301634,0.9926333,0.0003500801,0.000009980939,0.000416308,0.0000859868,0.001056846,0.0001659434,0.0003003712,0.002890036,0.0002517279],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972298,0.001102305,0.0000127872,0.0007686223,0.0004739872,0.0002235672,0.00001445798,0.00001849441,0.0001559776],"genre_scores_gemma":[0.9984589,0.0005428814,0.0002016233,0.0005159446,0.0002294382,0.000004102411,0.000005574895,0.000002600971,0.00003893327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8541465,"threshold_uncertainty_score":0.516026,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03584400555617398,"score_gpt":0.2787053553372508,"score_spread":0.2428613497810768,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}