{"id":"W2954494441","doi":"10.1016/j.cbpa.2019.05.032","title":"New discoveries in bacterial N-glycosylation to expand the synthetic biology toolbox","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Chemical Biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Campylobacter jejuni; Glycosylation; Glycan; Escherichia coli; Biology; Glycomics; Computational biology; Heterologous; Glycoprotein; Bacteria; Microbiology; Biochemistry; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003515783,0.0004357421,0.0009258307,0.0002476427,0.0000340506,0.00004203323,0.0006846697,0.0007543683,0.0002505837],"category_scores_gemma":[0.0005950877,0.0003013717,0.000260036,0.0004023337,0.0001427341,0.00000662526,0.0004496623,0.0005598539,0.0001665159],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001073823,"about_ca_system_score_gemma":0.0004810547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005031123,"about_ca_topic_score_gemma":0.00003774812,"domain_scores_codex":[0.9971777,0.0004420426,0.000788347,0.0009191397,0.0001119746,0.0005608415],"domain_scores_gemma":[0.9988045,0.0001721029,0.0001927531,0.0006511775,0.00004434484,0.0001351987],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001374469,0.00007091695,0.0001738537,0.001397869,0.00002708353,2.002022e-7,0.00003001853,0.00000230953,0.005900152,0.0005926229,0.002013613,0.9896539],"study_design_scores_gemma":[0.0004854687,0.0001618821,0.00001684111,0.001297876,0.0000131527,0.000007992428,0.000005238293,0.000003805124,0.0007519986,0.0001564916,0.9967476,0.0003517148],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001767501,0.9913206,0.0005711881,0.0002286641,0.003948996,0.001777217,0.0002076293,0.00001144514,0.0001667865],"genre_scores_gemma":[0.001444508,0.992526,0.00009384103,0.00002280944,0.001448017,0.0003537101,0.003964173,0.00004198061,0.0001049543],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9947339,"threshold_uncertainty_score":0.9999439,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09985628189988681,"score_gpt":0.4286215359721747,"score_spread":0.3287652540722878,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}