{"id":"W2954843486","doi":"10.1128/aem.00402-19","title":"<i>Bacillus subtilis</i> Strain DSM 29784 Modulates the Cecal Microbiome, Concentration of Short-Chain Fatty Acids, and Apparent Retention of Dietary Components in Shaver White Chickens during Grower, Developer, and Laying Phases","year":2019,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Ontario Agri-Food Innovation Alliance; Adisseo France","keywords":"Bacillus subtilis; Strain (injury); Food science; Microbiome; Biology; Bacterial strain; Fatty acid; Chemistry; Biochemistry; Microbiology; Bacteria; Anatomy; Bioinformatics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008113512,0.0001364729,0.0002334521,0.00001027857,0.00007666356,0.000006252691,0.00006326602,0.0001075801,0.00006047651],"category_scores_gemma":[0.000001004222,0.0000656496,0.00002799848,0.00004590451,0.00037271,0.00004201997,0.00010739,0.00008766303,0.000001052694],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001188438,"about_ca_system_score_gemma":0.000001225295,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002840594,"about_ca_topic_score_gemma":0.00002678442,"domain_scores_codex":[0.9992135,0.00005324368,0.0002511179,0.0002771807,0.0000299973,0.0001750024],"domain_scores_gemma":[0.9998044,0.00004599575,0.00007750322,0.00003650994,0.000003269057,0.00003231686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000112124,0.00007755915,0.1289915,0.0000213898,0.00001210452,4.051745e-7,0.0001297383,0.000003542715,0.8694325,0.00002630945,0.000003873402,0.001188917],"study_design_scores_gemma":[0.0005920826,0.0001600004,0.9628524,0.00002285929,0.000009224523,0.00002307602,0.001045146,0.00003327998,0.03491694,0.00007258123,0.0001412295,0.000131189],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987651,0.0004939119,9.901026e-7,0.00008829292,0.00002738354,0.0002929827,0.0003001881,0.000005210692,0.0000259407],"genre_scores_gemma":[0.9983711,0.0007507264,0.00003359739,0.00008495871,0.00001297102,0.000006270574,0.0007313043,0.000001434472,0.000007628885],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8345156,"threshold_uncertainty_score":0.2677113,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01489567677500103,"score_gpt":0.1759221024547857,"score_spread":0.1610264256797846,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}