{"id":"W2956832927","doi":"10.3897/biss.3.37986","title":"mBRAVE: The Multiplex Barcode Research And Visualization Environment","year":2019,"lang":"en","type":"article","venue":"Biodiversity Information Science and Standards","topic":"Environmental DNA in Biodiversity Studies","field":"Environmental Science","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"University of Guelph","keywords":"Barcode; Computer science; Data science; Cloud computing; Raw data; Visualization; Interface (matter); Software; Throughput; Software engineering; Data mining; Operating system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006251767,0.003579603,0.002510653,0.004597533,0.001196368,0.006205848,0.007400201,0.002859405,0.09892213],"category_scores_gemma":[0.01676498,0.002206984,0.002181083,0.002436594,0.001022176,0.006415559,0.006395701,0.005075108,0.04521471],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001079385,"about_ca_system_score_gemma":0.003211281,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003323347,"about_ca_topic_score_gemma":0.003830107,"domain_scores_codex":[0.9967547,0.0006351556,0.0002612445,0.0006134253,0.001406775,0.0003286849],"domain_scores_gemma":[0.9941512,0.002438799,0.0006063684,0.0009330713,0.001154892,0.0007156126],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002092729,0.0002268405,0.002383085,0.001984872,0.0003746867,0.0007779654,0.001034125,0.003357017,0.02857752,0.02153679,0.7754337,0.1622206],"study_design_scores_gemma":[0.0006285844,0.0002149018,0.003188558,0.0009719976,0.0001294635,0.0008319119,0.0001698581,0.05894033,0.04676725,0.03797375,0.8496758,0.0005075129],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.002027396,0.001397855,0.3384045,0.001289115,0.0007485114,0.0004491854,0.03617891,0.605413,0.01409156],"genre_scores_gemma":[0.03738968,0.002628601,0.7336717,0.002539589,0.0005422668,0.003768408,0.06558371,0.1273927,0.0264833],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.09892213,"threshold_uncertainty_score":0.3309275,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02625465695792757,"score_gpt":0.2790114312527517,"score_spread":0.2527567742948242,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}