{"id":"W2960501048","doi":"10.1111/evo.13810","title":"Evolutionary signatures of photoreceptor transmutation in geckos reveal potential adaptation and convergence with snakes","year":2019,"lang":"en","type":"article","venue":"Evolution","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; University Health Network","keywords":"Visual phototransduction; Biology; Opsin; Transducin; Evolutionary biology; Adaptation (eye); Gecko; Melanopsin; Cell biology; Retina; Zoology; Rhodopsin; Retinal; Neuroscience; Botany; Photopigment","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001075831,0.00008495708,0.0001225702,0.0001342622,0.00005733539,0.000003576309,0.00008268125,0.00009584719,0.00008289206],"category_scores_gemma":[0.00005757296,0.00007239862,0.00002038424,0.0002334452,0.0002423528,0.0002725906,0.00001475985,0.0001884572,0.00001821201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000035008,"about_ca_system_score_gemma":0.0000702782,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000579438,"about_ca_topic_score_gemma":0.00001388507,"domain_scores_codex":[0.9989929,0.0002422408,0.0001562199,0.0002978229,0.0001445168,0.0001663543],"domain_scores_gemma":[0.9996586,0.0001029473,0.00007236083,0.00009207762,0.00004779639,0.00002614751],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006119685,0.00005295064,0.0077009,0.00002858156,0.000002431119,0.000002434119,0.0002261516,0.002409462,0.9875458,0.001266226,0.00003559294,0.0001174882],"study_design_scores_gemma":[0.00149141,0.00125191,0.6483552,0.00008856662,0.00000947515,0.00003520598,0.0002216144,0.02916946,0.3169235,0.002230336,0.00002471928,0.0001985574],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986874,0.0001198714,0.0004636325,0.00006387087,0.0001575504,0.0003476996,0.0000134264,0.00001850007,0.0001280112],"genre_scores_gemma":[0.9996718,0.00002609853,0.0000939757,0.00004039149,0.00002043693,0.00001602897,0.00001701921,0.000006395671,0.0001078796],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6706223,"threshold_uncertainty_score":0.295233,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0128072240499792,"score_gpt":0.2373865727930094,"score_spread":0.2245793487430302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}