{"id":"W2962603824","doi":"10.1094/pdis-03-19-0563-re","title":"Pathogenicity and a TaqMan Real-Time PCR for Specific Detection of <i>Pantoea allii</i>, a Bacterial Pathogen of Onions","year":2019,"lang":"en","type":"article","venue":"Plant Disease","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University; Canadian Food Inspection Agency; International Development Research Centre","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; TaqMan; Pathogen; Pantoea; Inoculation; Microbiology; Botany; Phylogenetic tree; Gene; 16S ribosomal RNA; Polymerase chain reaction; Genetics; Horticulture","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001160637,0.001189288,0.0007524148,0.0009242861,0.0003991165,0.0008390149,0.0008756733,0.001041449,0.001856548],"category_scores_gemma":[0.001585339,0.0008566231,0.0007752865,0.0009326209,0.0006962785,0.000450098,0.0004945568,0.0009476407,0.0007957587],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006936626,"about_ca_system_score_gemma":0.001052173,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002192707,"about_ca_topic_score_gemma":0.004563306,"domain_scores_codex":[0.9958151,0.000706971,0.0002965999,0.001439637,0.001236776,0.0005048872],"domain_scores_gemma":[0.9990168,0.0002867382,0.000224078,0.0001321644,0.0002481666,0.00009205285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009868405,0.00005749508,0.001066581,0.00006264347,0.000008073357,0.00003827117,0.00009118787,0.0001884263,0.9957632,0.0001512545,0.00008535719,0.00238889],"study_design_scores_gemma":[0.00006070683,0.00121141,0.01875233,0.00004850662,0.00008781171,0.0004530199,0.0001892749,0.008069599,0.9616587,0.0001727095,0.009243388,0.00005263165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.807668,0.001414257,0.1752366,0.0003398927,0.0003227161,0.001408187,0.004508642,0.001677318,0.007424389],"genre_scores_gemma":[0.6357828,0.001440194,0.3246067,0.0005495918,0.0001134695,0.004434784,0.01356611,0.0002288129,0.0192776],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002192707,"threshold_uncertainty_score":0.006210744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01288758688713023,"score_gpt":0.1810134658700785,"score_spread":0.1681258789829483,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}