{"id":"W2963024031","doi":"10.3390/toxins11070426","title":"Comparative Analysis of Listeria monocytogenes Plasmids and Expression Levels of Plasmid-Encoded Genes during Growth under Salt and Acid Stress Conditions","year":2019,"lang":"en","type":"article","venue":"Toxins","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates Bio Solutions","keywords":"Plasmid; Listeria monocytogenes; Biology; Microbiology; Gene; Escherichia coli; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001571036,0.0002995367,0.0003740549,0.0006685616,0.0001419683,0.0004450413,0.00015153,0.0002404273,0.0005869676],"category_scores_gemma":[0.0004378801,0.0001706609,0.0003043166,0.0006046327,0.0001762601,0.0002182737,0.0002559095,0.0003097027,0.000273367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000173996,"about_ca_system_score_gemma":0.0002063471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001287609,"about_ca_topic_score_gemma":0.001029596,"domain_scores_codex":[0.9997861,0.00001847333,0.00001598066,0.00005793726,0.00005550193,0.00006598219],"domain_scores_gemma":[0.9995421,0.0001313389,0.0001160073,0.00002832095,0.0001064949,0.00007567407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004705298,0.00004271142,0.01069077,0.00006614561,0.00001427517,0.00007158392,0.0001670079,0.00008749567,0.9852652,0.00002215383,0.00003946165,0.003062605],"study_design_scores_gemma":[0.00002462045,0.001559902,0.5740778,0.00003732155,0.0001048841,0.0006613246,0.0008105504,0.001541577,0.4192412,0.00007814466,0.001826404,0.00003625051],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983797,0.0002261907,0.0004779401,0.00001460052,0.000003147135,0.000009416195,0.0006163668,0.00002167035,0.0002509662],"genre_scores_gemma":[0.9934308,0.0003326968,0.001766715,0.0000424485,0.000005826289,0.00004735021,0.003150932,0.00002828605,0.001195048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001287609,"threshold_uncertainty_score":0.002560198,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05627503532809607,"score_gpt":0.3252234513108465,"score_spread":0.2689484159827504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}