{"id":"W2963260999","doi":"10.1101/709311","title":"Genome diversity and species richness in mammals","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Biology; Synteny; Evolutionary biology; Genome; Species richness; Clade; Phylogenetic diversity; Karyotype; Phylogenetic tree; Lineage (genetic); Genetic diversity; Genetics; Chromosome; Ecology; Gene; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005349526,0.0001218417,0.000286342,0.001566792,0.0002428461,0.0005773077,0.0002244799,0.0002589399,0.001742162],"category_scores_gemma":[0.001336261,0.0001366871,0.0001784392,0.0007439283,0.0004739806,0.0004001798,0.0006717453,0.0002274292,0.0001590492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001138146,"about_ca_system_score_gemma":0.00005423974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003926799,"about_ca_topic_score_gemma":0.0004527541,"domain_scores_codex":[0.9996967,0.00008590392,0.00001827987,0.0001198862,0.00004970122,0.00002952635],"domain_scores_gemma":[0.9987356,0.0005136229,0.0004091311,0.00009401068,0.00008673524,0.0001608774],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001592112,0.00001397086,0.9414604,0.00005017053,0.0004299485,0.00008208602,0.0002314143,0.0004705232,0.05270139,0.0002660884,0.00006561755,0.004069147],"study_design_scores_gemma":[0.000001644369,0.00002843808,0.9980218,0.000003249514,0.00001744537,0.0001987413,0.00007973497,0.0004569853,0.0008021463,0.0002788024,0.0001078985,0.00000302199],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987908,0.0003321035,0.0004052842,0.00001714825,0.000001010422,0.000001243209,0.0001830056,0.000009465286,0.0002600128],"genre_scores_gemma":[0.9995062,0.00004744356,0.0001970248,0.00000803424,0.000003692183,0.000001635735,0.0001764725,0.000002799281,0.00005664145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001742162,"threshold_uncertainty_score":0.005828083,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01435651287917373,"score_gpt":0.1987501097782377,"score_spread":0.184393596899064,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}