{"id":"W2963813129","doi":"10.1016/j.mib.2019.06.005","title":"Environmental and clinical antibiotic resistomes, same only different","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Ontario Research Foundation","keywords":"Biology; Antibiotic resistance; Resistance (ecology); Gene; Function (biology); Antibiotics; Bacteria; Disease; Genetics; Biotechnology; Ecology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003023218,0.000613231,0.00170831,0.000156399,0.00004310218,0.00002682799,0.0004640523,0.0009933182,0.00005667158],"category_scores_gemma":[0.00005980409,0.0005079748,0.0004505173,0.00006005391,0.0004877341,0.000003474321,0.0005597317,0.0005969909,0.0001589184],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009422542,"about_ca_system_score_gemma":0.0001944267,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001853101,"about_ca_topic_score_gemma":0.000006441594,"domain_scores_codex":[0.9964088,0.0006617347,0.001158687,0.001230128,0.00005273767,0.0004878972],"domain_scores_gemma":[0.9985378,0.000107322,0.0005137341,0.0007283954,0.00001058386,0.0001021608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007278174,0.0005021716,0.0277038,0.01269163,0.0002524658,0.000002087514,0.000008158321,5.863708e-8,0.001345339,0.00005064937,0.007086896,0.9502839],"study_design_scores_gemma":[0.0005085053,0.000239866,0.007225814,0.003453889,0.0001184978,0.0001213086,0.000007123564,2.497323e-7,0.000008536334,0.000003626234,0.987779,0.0005336232],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01204994,0.9795521,0.00001204329,0.00001062268,0.00707529,0.0008116046,0.000451321,0.000009729653,0.00002731718],"genre_scores_gemma":[0.0009910776,0.9936248,0.00005985016,0.00001690905,0.0007007419,0.000005979389,0.00431407,0.00006665305,0.0002198955],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9806921,"threshold_uncertainty_score":0.9997372,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05652458589353661,"score_gpt":0.3735214333602411,"score_spread":0.3169968474667045,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}