{"id":"W2964450563","doi":"10.1093/aob/mcz114","title":"Mycoheterotrophic Epirixanthes (Polygalaceae) has a typical angiosperm mitogenome but unorthodox plastid genomes","year":2019,"lang":"en","type":"article","venue":"Annals of Botany","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Stockholms Universitet; Danmarks Tekniske Universitet; Danmarks Frie Forskningsfond","keywords":"Biology; Plastid; Evolutionary biology; Genome; Botany; Chloroplast; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001730913,0.0002301425,0.0003211526,0.00005383049,0.00006060093,0.00002672045,0.0003195356,0.000186104,0.0002213301],"category_scores_gemma":[0.00007137948,0.0002083492,0.0002381561,0.00009154499,0.0001124251,0.000007417862,0.0001551367,0.00008903456,0.0001194721],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004733658,"about_ca_system_score_gemma":0.0001165213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001409592,"about_ca_topic_score_gemma":0.000008321574,"domain_scores_codex":[0.998601,0.00004420614,0.0003114271,0.0004368492,0.0001923038,0.0004142284],"domain_scores_gemma":[0.9990739,0.00002810651,0.0001499162,0.0004733595,0.0001316624,0.0001430845],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002833504,0.0001118342,0.001310282,0.00004623639,0.0001059461,0.000005518314,0.00003114362,0.00001099236,0.9971433,0.0001231684,0.0002766905,0.0005515159],"study_design_scores_gemma":[0.0003232888,0.0008219349,0.001761235,0.00004178173,0.00002117482,0.0000352754,0.00004707288,0.00004020112,0.9634089,0.0003122726,0.03292217,0.0002646986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942945,0.003478833,0.0003437989,0.0003953294,0.0002202376,0.0002391184,0.00008118599,0.00001787746,0.0009291623],"genre_scores_gemma":[0.9968951,0.001044814,0.0003290772,0.0004720644,0.0001600975,0.00001603709,0.00001821969,0.00003854917,0.001025982],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03373443,"threshold_uncertainty_score":0.8496234,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03492049556311263,"score_gpt":0.2670397188082109,"score_spread":0.2321192232450982,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}