{"id":"W2965756664","doi":"10.1016/j.vetimm.2019.109919","title":"WC1+ and WC1neg γδ T lymphocytes in intestinal mucosa of healthy and Mycobacterium avium subspecies paratuberculosis-infected calves","year":2019,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Ontario Veterinary College, University of Guelph; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Mycobacterium avium subspecies paratuberculosis; Lamina propria; Biology; Ileum; Immune system; Paratuberculosis; Microbiology; T cell; Intestinal mucosa; Large intestine; Small intestine; Immunology; Mycobacterium; Epithelium; Medicine; Bacteria; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003697724,0.0003133919,0.0008766833,0.0004511015,0.00008810788,0.0000222631,0.0001079664,0.0003333463,0.0001496722],"category_scores_gemma":[0.0002831687,0.0002816786,0.00005618534,0.0002335584,0.0009624393,0.0002014103,0.0003766004,0.0004510009,0.00002068029],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006092486,"about_ca_system_score_gemma":0.000135281,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002375874,"about_ca_topic_score_gemma":0.0000105285,"domain_scores_codex":[0.9978284,0.0003978845,0.0005386586,0.0005346661,0.00009929936,0.0006010516],"domain_scores_gemma":[0.9987085,0.0005055297,0.0001462757,0.0004056026,0.0001082346,0.0001258476],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.003987654,0.0001880892,0.4239725,0.0003591349,0.00005938121,0.0003037646,0.0005307007,5.262476e-8,0.5681141,0.0002251512,0.00001565606,0.002243758],"study_design_scores_gemma":[0.003928846,0.01150575,0.9657382,0.0002338715,0.00004374052,0.01031587,0.000467836,0.00002041739,0.00661635,0.0001065841,0.000797866,0.0002246193],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9800159,0.01805784,0.000002294909,0.0007367129,0.0002796929,0.0004988421,0.00002557119,0.00004196453,0.0003411644],"genre_scores_gemma":[0.9845852,0.01460207,0.000295763,0.0002667129,0.00003110117,0.00006297784,0.00005373117,0.00002460285,0.000077898],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5614977,"threshold_uncertainty_score":0.9999635,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01604957664142796,"score_gpt":0.279364453721433,"score_spread":0.2633148770800051,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}