{"id":"W2965947541","doi":"10.1128/mra.00560-19","title":"Whole-Genome Sequencing of Four <i>Campylobacter</i> Strains Isolated from Gull Excreta Collected from Hobie Beach (Oxnard, CA, USA)","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Office of Research and Development; U.S. Environmental Protection Agency","keywords":"Biology; Whole genome sequencing; Zoology; Genome; Microbiology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003597116,0.0007140567,0.0006284351,0.001005781,0.0007183604,0.0008774444,0.0003877959,0.0005932632,0.002328983],"category_scores_gemma":[0.0006164273,0.0003674851,0.0008913797,0.00169827,0.0002398922,0.0002824673,0.0005192917,0.0009390076,0.001411806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007700784,"about_ca_system_score_gemma":0.002180545,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05265192,"about_ca_topic_score_gemma":0.1046497,"domain_scores_codex":[0.9996787,0.00001854482,0.0000237817,0.0001313257,0.0001003002,0.00004729543],"domain_scores_gemma":[0.9993014,0.00009213918,0.0001616849,0.00005162332,0.0002750728,0.0001181221],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001634388,0.0002869478,0.0547372,0.002149969,0.0004169559,0.0008518596,0.001518719,0.001524803,0.8570043,0.0004091143,0.03856029,0.04090544],"study_design_scores_gemma":[0.000223091,0.0005176305,0.85767,0.0003786372,0.0005242263,0.0006635069,0.001172998,0.001928914,0.04091975,0.0002080183,0.09569705,0.00009605171],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5295885,0.001835183,0.004714733,0.0006962052,0.0002273065,0.0002714696,0.4551964,0.0008855773,0.006584518],"genre_scores_gemma":[0.2346159,0.001123771,0.02009868,0.0005623545,0.00004698493,0.0002729385,0.7365016,0.0003951624,0.006382608],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05265192,"threshold_uncertainty_score":0.1046909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02551264287147589,"score_gpt":0.2142852200912473,"score_spread":0.1887725772197714,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}