{"id":"W2966593995","doi":"10.1101/718247","title":"Developmental Genome-Wide DNA Methylation Asymmetry Between Mouse Placenta and Embryo","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre; Ontario Genomics; McGill University Health Centre; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"DNA methylation; Biology; Methylation; Differentially methylated regions; Epigenetics; DNMT3B; Embryo; Genetics; Placenta; Methyltransferase; Embryogenesis; Cell biology; Andrology; Fetus; DNA; Gene; Pregnancy; Gene expression; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002487637,0.0002549858,0.0001840048,0.0007903693,0.000135156,0.0003995461,0.0001957374,0.0003080075,0.001583177],"category_scores_gemma":[0.0001918113,0.0003906212,0.0002141577,0.0002488849,0.0002545017,0.0001904812,0.0003980328,0.0004140054,0.0003908279],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002652569,"about_ca_system_score_gemma":0.0001357687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007062201,"about_ca_topic_score_gemma":0.0008433488,"domain_scores_codex":[0.9997901,0.00002572006,0.00001277877,0.00008630926,0.00005449082,0.00003066205],"domain_scores_gemma":[0.9998298,0.00002713919,0.00005950252,0.0000327786,0.00001856123,0.00003220189],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009309965,0.000002305146,0.001176129,0.00001485581,0.000006618368,0.00002731333,0.0000174001,0.00004463163,0.996882,0.000149549,0.00002348784,0.001562649],"study_design_scores_gemma":[0.00001817356,0.0001095374,0.07473709,0.00001750662,0.00004089782,0.0007488579,0.00004366764,0.001072987,0.918332,0.0003935831,0.004474401,0.00001130978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9791487,0.002765174,0.01257759,0.0000893227,0.00001765422,0.00001771122,0.002287745,0.0003133768,0.00278272],"genre_scores_gemma":[0.9872093,0.0009031993,0.006186225,0.00006135541,0.00000565484,0.00002695492,0.001720838,0.0001123324,0.003774053],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001583177,"threshold_uncertainty_score":0.00529629,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01264959478906039,"score_gpt":0.2230583984419482,"score_spread":0.2104088036528878,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}