{"id":"W2966620263","doi":"10.1007/978-1-4939-9597-4_18","title":"Genome-Based Bioinformatic Prediction of Major Histocompatibility (MHC)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Major histocompatibility complex; Genome; Computational biology; Biology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003127285,0.000606054,0.0004793822,0.0009973381,0.0003760809,0.0007313712,0.0005091592,0.0004978869,0.003539966],"category_scores_gemma":[0.0007863408,0.0001956443,0.0006991802,0.0007633949,0.0001484603,0.0002811342,0.0003167665,0.0007373407,0.001963591],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003767663,"about_ca_system_score_gemma":0.0005495779,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001566928,"about_ca_topic_score_gemma":0.00252299,"domain_scores_codex":[0.999843,0.00003869057,0.000009333698,0.00004817305,0.00004114271,0.00001965247],"domain_scores_gemma":[0.99978,0.0000913986,0.00002586034,0.00002122512,0.00005156423,0.00002986586],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00167695,0.0009348712,0.02731569,0.001151939,0.0005146723,0.001178971,0.0001753447,0.05916256,0.6932483,0.005943778,0.02054819,0.1881487],"study_design_scores_gemma":[0.0002943726,0.0006660518,0.04506404,0.0001317918,0.0007282631,0.001251755,0.0002559095,0.7217487,0.1763868,0.01405991,0.03932617,0.00008633413],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.6908309,0.002858638,0.2604738,0.0011419,0.0003247373,0.0002101806,0.02424486,0.01043484,0.009480096],"genre_scores_gemma":[0.739134,0.001010607,0.1967337,0.0005360647,0.00007352264,0.000110487,0.05880526,0.0008898136,0.002706607],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.003539966,"threshold_uncertainty_score":0.01184243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01717670576150098,"score_gpt":0.3132963751158307,"score_spread":0.2961196693543297,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}