{"id":"W2967579256","doi":"10.7717/peerj.7497","title":"Dynamics of a methanol-fed marine denitrifying biofilm: 1-Impact of environmental changes on the denitrification and the co-occurrence of <i>Methylophaga nitratireducenticrescens</i> and <i>Hyphomicrobium nitrativorans</i>","year":2019,"lang":"en","type":"article","venue":"PeerJ","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lallemand (Canada); Laurentian University; Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Denitrifying bacteria; Biofilm; Denitrification; Effluent; Seawater; Nitrate; Chemistry; Methanol; Environmental chemistry; Anoxic waters; Nitrite; Artificial seawater; Microorganism; Microbiology; Bacteria; Food science; Biology; Environmental engineering; Environmental science; Ecology; Nitrogen; Organic chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004270298,0.0002106153,0.0003470585,0.00005391558,0.00007933971,0.00001784494,0.0002247013,0.00006451519,0.0002447739],"category_scores_gemma":[0.00002209673,0.0001185119,0.0001117194,0.0001663422,0.0008226025,0.00007151188,0.0001155073,0.0001248272,0.0000117368],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006165265,"about_ca_system_score_gemma":0.00001314333,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003397306,"about_ca_topic_score_gemma":0.00005752259,"domain_scores_codex":[0.9987606,0.0001972322,0.0002948802,0.0002606363,0.0002877623,0.0001988388],"domain_scores_gemma":[0.998996,0.0003366836,0.0002826262,0.0003247067,0.00001008438,0.00004993783],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004866977,0.0001487533,0.1089105,0.00003499536,0.00009547258,7.394477e-7,0.0006747246,0.000007842765,0.8875714,0.0000862763,0.00002893282,0.001953681],"study_design_scores_gemma":[0.002042223,0.0003776525,0.06952172,0.00003029276,0.000149426,0.00002026037,0.000466008,0.0007571692,0.9262258,0.000235394,0.00001551114,0.0001585499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980493,0.0001911028,0.00001185947,0.0003056164,0.0000298013,0.0006733146,0.0003774006,0.000006323931,0.0003552778],"genre_scores_gemma":[0.9990245,0.0002255448,0.0005132256,0.00002803116,0.00000721568,0.00001261925,0.00007030673,0.00001141635,0.0001071249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03938878,"threshold_uncertainty_score":0.4832775,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01001320176124123,"score_gpt":0.223777103374601,"score_spread":0.2137639016133598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}