{"id":"W2968755345","doi":"10.1002/gepi.22242","title":"Genetic overlap between autoimmune diseases and non‐Hodgkin lymphoma subtypes","year":2019,"lang":"en","type":"article","venue":"Genetic Epidemiology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; McGill University Health Centre; Canada's Michael Smith Genome Sciences Centre; Simon Fraser University; BC Cancer Agency; University of Calgary; McGill University","funders":"National Center for Advancing Translational Sciences; National Center for Chronic Disease Prevention and Health Promotion; National Institute of Environmental Health Sciences; Utah Department of Health; National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Human Genome Research Institute; Medical Research Council; National Institutes of Health; Blood Cancer UK; National Institute for Health and Care Research; Vlaamse regering; Cancerfonden; Bundesamt für Strahlenschutz; Leukemia and Lymphoma Research; National Health and Medical Research Council; National Center for Research Resources; Institut National Du Cancer; Associazione Italiana per la Ricerca sul Cancro; University of Utah; Fondation de France; Generalitat de Catalunya; Canadian Institutes of Health Research; Fonds Wetenschappelijk Onderzoek; Bundesministerium für Bildung und Forschung; Academy of Finland; Institut National de la Santé et de la Recherche Médicale; Michael Smith Health Research BC; National Institute on Aging; Health Research Board; World Health Organization; Wellcome Trust; National Heart, Lung, and Blood Institute; Multiple Sclerosis Australia; Helsingin ja Uudenmaan Sairaanhoitopiiri; Multiple Sclerosis Society; Deutsche Forschungsgemeinschaft; Scleroseforeningen; National Natural Science Foundation of China; Lymphoma Foundation; Karolinska Institutet; Utah State University; Huntsman Cancer Institute; Wellcome; José Carreras Leukämie-Stiftung; European Commission; Biogen; U.S. Department of Veterans Affairs; Fondation pour l'Aide à la Recherche sur la Sclérose en Plaques; U.S. Department of Health and Human Services","keywords":"Genome-wide association study; Lymphoma; Disease; Follicular lymphoma; Genetic association; Etiology; Rheumatoid arthritis; Oncology; Medicine; Immunology; Biology; Internal medicine; Genetics; Single-nucleotide polymorphism; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002253207,0.0002908923,0.001045953,0.0001053592,0.00006684903,0.000007658358,0.0001116776,0.0002115504,0.0002567111],"category_scores_gemma":[0.0003029971,0.0002261722,0.0001662881,0.0001060985,0.0001669805,0.00002384586,0.0001203774,0.00006391574,0.0005292917],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001099943,"about_ca_system_score_gemma":0.0001339612,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003477162,"about_ca_topic_score_gemma":0.000005480331,"domain_scores_codex":[0.997889,0.0002343919,0.0005846525,0.0006182172,0.0001182857,0.0005554107],"domain_scores_gemma":[0.9976402,0.001217878,0.0001702098,0.0006301138,0.00004434481,0.0002972651],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005597403,0.0001319225,0.9286069,0.00007211982,0.0002178261,0.00004984517,0.00003839818,0.00002315544,0.0002247517,0.00009259208,0.0007167023,0.06976986],"study_design_scores_gemma":[0.003173879,0.0008367785,0.9875987,0.00006848793,0.0004246897,0.000119467,0.00002166599,0.0002494754,0.0001222164,0.001541522,0.00563335,0.000209736],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9802288,0.01651987,0.0001100468,0.001509344,0.0002683238,0.0006089699,0.00003204749,0.00006001275,0.0006625868],"genre_scores_gemma":[0.9903853,0.001679465,0.005453986,0.001553293,0.0002730785,0.00007729648,0.00005017553,0.00003336053,0.0004940273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06956013,"threshold_uncertainty_score":0.9223034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01992103020617053,"score_gpt":0.287575941220815,"score_spread":0.2676549110146444,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}