{"id":"W2969240680","doi":"10.1002/gcc.22803","title":"Genetic diversity in alveolar soft part sarcoma: A subset contain variant fusion genes, highlighting broader molecular kinship with other MiT family tumors","year":2019,"lang":"en","type":"article","venue":"Genes Chromosomes and Cancer","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University; Hospital for Sick Children; Sinai Health System; University of Toronto","funders":"National Cancer Institute","keywords":"Histogenesis; Alveolar soft part sarcoma; TFE3; Fusion gene; Malignancy; Biology; Gene rearrangement; Pathology; Sarcoma; Cabozantinib; Renal cell carcinoma; Medicine; Genetics; Gene; Immunohistochemistry; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009917226,0.0002978226,0.0004877236,0.0000993385,0.0001253612,0.00003219449,0.00009913845,0.0001070406,0.0003295022],"category_scores_gemma":[0.000003118341,0.000220224,0.00009177065,0.0002003503,0.00006161357,0.00006020218,0.0001556839,0.0001166039,0.00002075873],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001594515,"about_ca_system_score_gemma":0.0001308352,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003148725,"about_ca_topic_score_gemma":0.0005186432,"domain_scores_codex":[0.9983751,0.00006458392,0.0002436244,0.0005542781,0.0003330389,0.0004293451],"domain_scores_gemma":[0.9993129,0.00004073946,0.0001005152,0.0003232317,0.00005580078,0.000166811],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001831465,0.0002455401,0.9653494,0.0001215116,0.0002194268,0.0008351477,0.0003452334,0.00008993931,0.01085652,0.0000672769,0.00008768566,0.02159914],"study_design_scores_gemma":[0.005478377,0.0003748109,0.9671785,0.0005042437,0.0003142923,0.0001400247,0.0003073615,0.0001745335,0.005269152,0.00003198369,0.0198494,0.0003772774],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9102169,0.08826105,0.00002304254,0.0005422666,0.0001068029,0.0006281578,0.00004030746,0.00003130083,0.0001501746],"genre_scores_gemma":[0.9942592,0.003598112,0.0003546616,0.00131153,0.0001175045,0.0001065832,0.00002236746,0.00004324698,0.0001868141],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08466294,"threshold_uncertainty_score":0.8980474,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0172761573498897,"score_gpt":0.2372666241037119,"score_spread":0.2199904667538221,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}