{"id":"W2969279165","doi":"10.3389/fgene.2019.00865","title":"The Interplay of Human and Mycobacterium Tuberculosis Genomic Variability","year":2019,"lang":"en","type":"review","venue":"Frontiers in Genetics","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium tuberculosis; Biology; Tuberculosis; Genetics; Computational biology; Virology; Evolutionary biology; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008453662,0.0003406246,0.001736825,0.0002307252,0.00005987917,0.00004473368,0.0003315227,0.0003629059,0.00003785074],"category_scores_gemma":[0.0002769878,0.0002283578,0.0003163736,0.000230821,0.000285411,0.00002204581,0.0003054542,0.0005524326,0.00001052481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002440588,"about_ca_system_score_gemma":0.0003409528,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002544884,"about_ca_topic_score_gemma":0.000008333597,"domain_scores_codex":[0.9976623,0.0003624841,0.0008205552,0.0004602292,0.0002650786,0.0004293751],"domain_scores_gemma":[0.9981665,0.0003777951,0.0002447225,0.0009464633,0.00008555419,0.0001789687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005604454,0.0001267864,0.06584984,0.03446715,0.0004906853,0.00001051397,0.000102962,1.528889e-7,0.00004548995,0.00002594251,0.008621562,0.8902029],"study_design_scores_gemma":[0.0004501189,0.000384621,0.01145617,0.0049116,0.00104089,0.00002249082,0.00003923127,0.0000250737,0.00002056653,0.000121237,0.9812615,0.000266529],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.005541832,0.9912921,0.00004229532,0.00003787892,0.0008129742,0.001462365,0.0001099236,0.000009857875,0.0006908412],"genre_scores_gemma":[0.00056165,0.9975349,0.001232231,0.00002052369,0.0001495504,0.00009627658,0.00009669451,0.00005300295,0.000255221],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9726399,"threshold_uncertainty_score":0.9312159,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0251379291952592,"score_gpt":0.3375938921963868,"score_spread":0.3124559630011276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}