{"id":"W2969335237","doi":"10.1186/s40168-019-0726-2","title":"The occurrence of Listeria monocytogenes is associated with built environment microbiota in three tree fruit processing facilities","year":2019,"lang":"en","type":"article","venue":"Microbiome","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Food and Agriculture; U.S. Food and Drug Administration; Hamilton Health Sciences Foundation; U.S. Department of Agriculture","keywords":"Listeria monocytogenes; Biology; Mycobiota; Outbreak; Food science; Contamination; Pathogen; Microbiology; Food microbiology; Microbial ecology; Microbiome; Bacteria; Botany; Ecology; Virology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002102352,0.0002817712,0.0002335521,0.0006985113,0.0005550097,0.0007572146,0.0001997647,0.0003580082,0.0007000327],"category_scores_gemma":[0.0004055142,0.0001476857,0.0003039058,0.0005566223,0.0004184984,0.000269091,0.0006786482,0.0002399256,0.00009635678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004391132,"about_ca_system_score_gemma":0.000373493,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005442815,"about_ca_topic_score_gemma":0.01028044,"domain_scores_codex":[0.9997547,0.00003029404,0.00001869057,0.00006789017,0.00005822842,0.00007003936],"domain_scores_gemma":[0.9995397,0.00005720871,0.0002176331,0.00001751895,0.00007183276,0.0000960828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004686711,0.000140534,0.9311902,0.00007870302,0.00003877345,0.000476055,0.001433766,0.00007946241,0.06161207,0.00002535023,0.0000510579,0.004405448],"study_design_scores_gemma":[0.000001755022,0.0002151582,0.9964478,0.000007815432,0.00001758705,0.0002573498,0.0009970812,0.00007000796,0.001882389,0.000008546488,0.00008954146,0.000004860289],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998273,0.00002264648,0.0000452055,0.000002840265,3.273197e-7,0.000003086509,0.00004841021,0.000001043698,0.00004916881],"genre_scores_gemma":[0.9995289,0.0000315384,0.0002373504,0.000006338209,8.026323e-7,0.000005573546,0.0001201164,0.00000104606,0.00006834047],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005442815,"threshold_uncertainty_score":0.0108223,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04027758142562252,"score_gpt":0.266596878484288,"score_spread":0.2263192970586655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}