{"id":"W2969367734","doi":"10.1101/741009","title":"Identification of immunoreactive linear epitopes of <i>Borrelia miyamotoi</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health","keywords":"Borrelia; Epitope; Biology; Borrelia burgdorferi; Virology; Serology; relapsing fever; Antigen; Computational biology; Antibody; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001578457,0.0003192124,0.0001132052,0.0002468402,0.0001035784,0.0002942664,0.0001144627,0.0002464988,0.001699891],"category_scores_gemma":[0.0001476024,0.00009626456,0.0001306024,0.0001318789,0.0001111457,0.0001136205,0.0001802675,0.0002427135,0.0006176826],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001150048,"about_ca_system_score_gemma":0.00005845097,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003880465,"about_ca_topic_score_gemma":0.0003749075,"domain_scores_codex":[0.9999225,0.00001354154,0.00000482037,0.00002513146,0.0000149698,0.00001901108],"domain_scores_gemma":[0.9999416,0.00001835225,0.00001228598,0.000006536543,0.000009998684,0.00001118712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005497392,0.000008452066,0.00114824,0.00002417302,0.000004083101,0.00003125987,0.00001035595,0.00003415154,0.9974279,0.00002193901,0.00004948217,0.001185151],"study_design_scores_gemma":[0.00001928354,0.0003328206,0.0585926,0.00001917322,0.00002540775,0.0008580844,0.00007959138,0.00197262,0.9347087,0.0001124299,0.003272637,0.000006776108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921765,0.0007708283,0.004241768,0.00008656111,0.00001653821,0.00001752211,0.0004282104,0.00006546918,0.002196533],"genre_scores_gemma":[0.9871469,0.0003847321,0.009197008,0.0001054955,0.00001154117,0.00001803852,0.001273811,0.00001956446,0.001843029],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001699891,"threshold_uncertainty_score":0.0056867,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008339437743172307,"score_gpt":0.2188877604411278,"score_spread":0.2105483226979555,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}