{"id":"W2969376443","doi":"10.1107/s2059798319010866","title":"Structures of the substrate-binding protein YfeA in apo and zinc-reconstituted holo forms","year":2019,"lang":"en","type":"article","venue":"Acta Crystallographica Section D Structural Biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Light Source (Canada)","funders":"National Cancer Institute; National Research Council Canada; National Institute of General Medical Sciences; Western Economic Diversification Canada; Canadian Light Source; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Office of Science; National Institutes of Health; University of Saskatchewan; Argonne National Laboratory; U.S. Department of Energy","keywords":"Substrate (aquarium); Chemistry; Crystallography; Protein structure; Plasma protein binding; Binding site; Metal; Cluster (spacecraft); Biophysics; Stereochemistry; Biochemistry; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001815481,0.0004123747,0.0003396117,0.000291524,0.0003884429,0.0005493354,0.000820907,0.0004835515,0.001003147],"category_scores_gemma":[0.0003371112,0.0002674489,0.0003560014,0.0003804542,0.0003179313,0.000357863,0.0002560665,0.0007966001,0.0002689679],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001068896,"about_ca_system_score_gemma":0.000294635,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004002089,"about_ca_topic_score_gemma":0.001966044,"domain_scores_codex":[0.9999069,0.00001132703,0.000007869744,0.00002801924,0.00003070854,0.0000151575],"domain_scores_gemma":[0.9998531,0.00002909316,0.00003709642,0.00001449011,0.00002996699,0.00003625166],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002152152,0.0004365623,0.00916217,0.0004586781,0.0001420318,0.0009151163,0.0008505927,0.004512901,0.9663911,0.002559774,0.001163392,0.0112556],"study_design_scores_gemma":[0.0006294166,0.0008380085,0.1684352,0.0001580089,0.0002146784,0.001969026,0.002031376,0.08308969,0.7219688,0.002184093,0.01829354,0.0001881681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965565,0.0007490767,0.001219923,0.00008726672,0.00001108835,0.000008438621,0.0005165013,0.00006352483,0.0007876169],"genre_scores_gemma":[0.9935961,0.0006485067,0.002319063,0.00002601107,0.000008005157,0.00002124331,0.001880751,0.0000456002,0.001454669],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004002089,"threshold_uncertainty_score":0.007957578,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005714386898741253,"score_gpt":0.2136406370087794,"score_spread":0.2079262501100381,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}