{"id":"W2969502334","doi":"10.7717/peerj.7532","title":"The complete mitochondrial genome of <i>Pyxicephalus adspersus</i> : high gene rearrangement and phylogenetics of one of the world’s largest frogs","year":2019,"lang":"en","type":"article","venue":"PeerJ","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University","funders":"Natural Science Foundation of Zhejiang Province; National Natural Science Foundation of China","keywords":"Biology; Transfer RNA; Mitochondrial DNA; Genetics; Gene; Phylogenetic tree; Ribosomal RNA; Genome; Phylogenetics; Monophyly; Evolutionary biology; Clade; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001035956,0.000208947,0.0001929977,0.0005614568,0.0003156129,0.0002339758,0.0001637082,0.0002303551,0.0009820912],"category_scores_gemma":[0.0002244367,0.0001292879,0.0002624464,0.0006180283,0.000195982,0.0002776927,0.000223511,0.0003363432,0.0002985986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002133403,"about_ca_system_score_gemma":0.0003278199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001118107,"about_ca_topic_score_gemma":0.001796155,"domain_scores_codex":[0.9999086,0.000008220939,0.00000730478,0.00004045211,0.0000242555,0.0000113103],"domain_scores_gemma":[0.9998813,0.00001995723,0.00004889081,0.00001204115,0.00001383434,0.00002398033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003927594,0.00002961546,0.02972153,0.0003868406,0.0000528847,0.0005509995,0.0004870501,0.0004130121,0.9478918,0.0003075618,0.0002219677,0.01954394],"study_design_scores_gemma":[0.00003875654,0.0004441485,0.9122711,0.0001241285,0.0002176224,0.004869786,0.0006012599,0.002152073,0.05768932,0.0003815479,0.02116694,0.00004323543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9932434,0.0005835515,0.001978781,0.0000361709,0.000007525541,0.0000165085,0.003473473,0.00003507321,0.0006254591],"genre_scores_gemma":[0.974051,0.0006042219,0.008134157,0.00005772337,0.00001527718,0.00003092389,0.01622973,0.0000306544,0.0008462082],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001118107,"threshold_uncertainty_score":0.003285468,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008540119959661866,"score_gpt":0.1922228245430177,"score_spread":0.1836827045833558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}