{"id":"W2969791748","doi":"10.1128/mra.00534-19","title":"Draft Genome Sequences of 14 <i>Lactobacillus</i> , <i>Enterococcus</i> , and <i>Staphylococcus</i> Isolates from the Nasopharynx of Healthy Feedlot Cattle","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Livestock and Meat Agency; Government of Canada","keywords":"Enterococcus hirae; Feedlot; Biology; Enterococcus; Microbiology; Lactobacillus paracasei; Staphylococcus; Genome; Staphylococcus aureus; Lactobacillus; Genetics; Gene; Bacteria; Animal science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004773504,0.0003398061,0.0006743195,0.0001337131,0.0002656471,0.00002230862,0.000574462,0.0003279529,0.0010454],"category_scores_gemma":[0.0000396622,0.0002474678,0.0001829379,0.0002729386,0.001098436,0.0000999152,0.0004215644,0.000418178,0.0004064188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005074651,"about_ca_system_score_gemma":0.0001370357,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008334592,"about_ca_topic_score_gemma":0.00006502566,"domain_scores_codex":[0.9974828,0.000478724,0.0007294522,0.0006160627,0.00005202804,0.0006409297],"domain_scores_gemma":[0.9981933,0.0003833418,0.000517315,0.0006382547,0.0002088689,0.0000588719],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005293135,0.0002568884,0.05327961,0.00008214758,0.0003562242,6.924892e-7,0.0005810245,0.00002018498,0.9353846,0.00002942245,0.009303963,0.0001759169],"study_design_scores_gemma":[0.004533924,0.001324758,0.004390239,0.0001837104,0.0001403003,0.00005871735,0.001327812,0.000001225113,0.216125,0.00005772058,0.7713593,0.0004972441],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9706886,0.01945496,0.00002903539,0.0005390738,0.0002961421,0.000770823,0.00764244,0.00003303363,0.0005458309],"genre_scores_gemma":[0.9936403,0.0006348455,0.00002628399,0.00153309,0.00004238123,0.00003037232,0.00317049,0.00002729811,0.0008949531],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7620554,"threshold_uncertainty_score":0.9999977,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01087189828739928,"score_gpt":0.2381938712579009,"score_spread":0.2273219729705016,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}