{"id":"W2969880110","doi":"10.1093/jac/dkz260","title":"Macrococcus canis contains recombinogenic methicillin resistance elements and the mecB plasmid found in Staphylococcus aureus","year":2019,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Institute of Veterinary Bacteriology, University of Bern; Bundesamt für Lebensmittelsicherheit und Veterinärwesen; Chulalongkorn University; University of Bern","keywords":"Plasmid; Biology; Genetics; Insertion sequence; Genome; Operon; Gene; Mobile genetic elements; Context (archaeology); Microbiology; Escherichia coli; Transposable element","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00201165,0.0004606052,0.001406954,0.0003894253,0.0001343708,0.000113318,0.0004798174,0.0002855784,0.0002212695],"category_scores_gemma":[0.0002233185,0.0003260785,0.0004323964,0.0006545348,0.0004898224,0.0002321998,0.00006868008,0.001124821,0.00002357897],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004054267,"about_ca_system_score_gemma":0.0006132757,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001193947,"about_ca_topic_score_gemma":0.0005893564,"domain_scores_codex":[0.9964335,0.0002676288,0.001596975,0.0004479134,0.0005845209,0.000669469],"domain_scores_gemma":[0.9970505,0.0004874032,0.001156891,0.0005267765,0.000578035,0.0002004201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.03103917,0.0005919687,0.04087433,0.000519156,0.001025494,0.0003252477,0.002484097,0.00005403475,0.8988738,0.0009192387,0.02144318,0.001850292],"study_design_scores_gemma":[0.2270927,0.003370874,0.07579755,0.007137704,0.001068313,0.000817212,0.002485803,0.000328451,0.3893264,0.004721851,0.2850077,0.002845386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9855027,0.001703162,0.0001762491,0.009774497,0.0005392273,0.001386796,0.00002766112,0.00002099354,0.0008686883],"genre_scores_gemma":[0.9845324,0.002459705,0.003763918,0.007227128,0.0002278297,0.00000715916,0.000004777883,0.00009005658,0.00168708],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5095474,"threshold_uncertainty_score":0.9999191,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008810157375150339,"score_gpt":0.2621695495438809,"score_spread":0.2533593921687305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}