{"id":"W2969893090","doi":"10.1093/jac/dkz289","title":"Dramatic rise in the proportion of ESBL-producing Escherichia coli and Klebsiella pneumoniae among clinical isolates identified in Canadian hospital laboratories from 2007 to 2016","year":2019,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; St. Boniface Hospital; Public Health Agency of Canada; University of Manitoba","funders":"Achaogen; Medicines Company; Zoetis; Public Health Agency of Canada; Diagnostic Services Manitoba; Sunovion; Bayer; University of Manitoba; AstraZeneca; Astellas Pharma US; Pfizer; Merck; Abbott Laboratories","keywords":"Amikacin; Ertapenem; Klebsiella pneumoniae; Broth microdilution; Tigecycline; Meropenem; Microbiology; Colistin; Biology; Escherichia coli; Antimicrobial; Antibiotic resistance; Medicine; Antibiotics; Minimum inhibitory concentration; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008876523,0.0001323174,0.0003260699,0.00008877765,0.00002329297,0.00005950437,0.0002418465,0.00015925,0.00001764729],"category_scores_gemma":[0.0001391639,0.0001018355,0.00006774627,0.0001730369,0.0001025692,0.00002267799,0.00002120962,0.0001858126,0.000002515178],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003164586,"about_ca_system_score_gemma":0.000312646,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005436909,"about_ca_topic_score_gemma":0.01151315,"domain_scores_codex":[0.9986643,0.00010734,0.000693188,0.0002127002,0.0001049071,0.0002175236],"domain_scores_gemma":[0.9990846,0.00002798339,0.00041922,0.0002310584,0.0001536182,0.00008355706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001363365,0.00006061601,0.5151134,0.00001567972,0.00002657932,0.00000544339,0.0004279769,0.000009456626,0.4830967,0.000001163779,0.000988395,0.000118204],"study_design_scores_gemma":[0.001008816,0.0003256528,0.8372822,0.0002544301,0.00001229732,0.000004649524,0.0003374735,0.00001114244,0.1594081,0.00002188676,0.001175449,0.0001578278],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982395,0.0001937702,0.0000279173,0.0007486953,0.0004337594,0.0003167498,0.00001401766,0.000001153057,0.00002447749],"genre_scores_gemma":[0.9982649,0.0004217926,0.0006983094,0.0003479953,0.0001909151,5.514235e-7,0.000006158501,0.00001791499,0.00005144362],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3236886,"threshold_uncertainty_score":0.8219016,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004532413720435222,"score_gpt":0.2495435400500816,"score_spread":0.2450111263296464,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}