{"id":"W2970181558","doi":"10.1002/pros.23897","title":"Metagenomic analysis reveals a rich bacterial content in high‐risk prostate tumors from African men","year":2019,"lang":"en","type":"article","venue":"The Prostate","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Petre Foundation; China Scholarship Council; Cancer Association of South Africa; National Research Foundation; University of Sydney; Australian Prostate Cancer Research","keywords":"Prostate cancer; Metagenomics; Biology; Prostate; Proteobacteria; Microbiome; Escherichia coli; Microbiology; Bacteria; Cancer; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002983248,0.0003389783,0.0004701678,0.00113442,0.000769105,0.0007116965,0.0001793184,0.0003350066,0.001373352],"category_scores_gemma":[0.0005258198,0.0002206863,0.0004838136,0.001007776,0.0002702662,0.0002294651,0.0006203502,0.0003077756,0.0002040505],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001974554,"about_ca_system_score_gemma":0.0002769526,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003281532,"about_ca_topic_score_gemma":0.004703445,"domain_scores_codex":[0.9997461,0.00004534817,0.00001547618,0.00008052129,0.00005730796,0.00005514801],"domain_scores_gemma":[0.9998335,0.00003647859,0.00004686866,0.00001457637,0.00003586903,0.00003278475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007664356,0.00009310573,0.773672,0.0003012782,0.0005005428,0.0005220517,0.002385839,0.0004114404,0.1991441,0.0001474061,0.0003345768,0.02172117],"study_design_scores_gemma":[0.000008267698,0.0002507585,0.9766294,0.00005624319,0.0003181757,0.001495763,0.002631306,0.001419423,0.01457954,0.0002075644,0.002378667,0.00002489717],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972444,0.0008947338,0.000625114,0.00006557711,0.000006392093,0.00001405268,0.0008535126,0.000009442137,0.0002867849],"genre_scores_gemma":[0.9974895,0.0003196779,0.001176229,0.00006544527,0.000009425301,0.00001310885,0.00068189,0.000007229331,0.0002375585],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003281532,"threshold_uncertainty_score":0.006524861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01121851093904469,"score_gpt":0.2451578858494994,"score_spread":0.2339393749104547,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}