{"id":"W2970514501","doi":"10.1371/journal.pone.0216188","title":"Ecological and evolutionary patterns in the enigmatic protist genus Percolomonas (Heterolobosea; Discoba) from diverse habitats","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; Dalhousie University","funders":"National Institute of Biological Resources; Natural Sciences and Engineering Research Council of Canada; Ministry of Education, India; National Research Foundation of Korea; Ministry of Education and Science of the Russian Federation; Ministry of Environment; Russian Foundation for Basic Research; National Research Foundation","keywords":"Biology; 18S ribosomal RNA; Protist; Clade; Monophyly; Phylogenetic tree; Flagellate; Ecology; Halophile; Genus; Habitat; Ecological niche; Ribosomal RNA; Phylogenetics; Evolutionary biology; Zoology; Botany; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001642504,0.0002239435,0.0002247238,0.00132459,0.000510875,0.0005217129,0.0001925564,0.0003228407,0.0003936345],"category_scores_gemma":[0.0003612538,0.0001456406,0.0001566821,0.0008401694,0.0006292316,0.0002669445,0.0006547665,0.0002218566,0.0001551338],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002211263,"about_ca_system_score_gemma":0.0002008934,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003150981,"about_ca_topic_score_gemma":0.005745647,"domain_scores_codex":[0.9998152,0.00001767837,0.00001730598,0.00007795177,0.00003657295,0.00003537484],"domain_scores_gemma":[0.9997639,0.00002418021,0.00009293334,0.00001844829,0.00004270396,0.00005778942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004196152,0.00005216946,0.6979596,0.000125193,0.0001003194,0.0005754885,0.005194279,0.0001000519,0.2807771,0.0001599873,0.00006664684,0.01446955],"study_design_scores_gemma":[0.000002732645,0.00005856416,0.9975915,0.000006144144,0.00001119427,0.0003650109,0.0009115458,0.00005454086,0.0006606485,0.00002392936,0.0003099989,0.000004253522],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995722,0.0001147876,0.00006012187,0.000007950043,7.101119e-7,0.000002745958,0.0000388656,0.00000132072,0.0002012629],"genre_scores_gemma":[0.9991485,0.0001969006,0.0002359727,0.000009739626,0.000002544428,0.000005555232,0.0002742442,0.000001809477,0.0001247249],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003150981,"threshold_uncertainty_score":0.006265283,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02437009851736475,"score_gpt":0.210847883839125,"score_spread":0.1864777853217603,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}