{"id":"W2971176350","doi":"10.1093/glycob/cwz066","title":"Bioinformatics analysis of diversity in bacterial glycan chain-termination chemistry and organization of carbohydrate-binding modules linked to ABC transporters","year":2019,"lang":"en","type":"review","venue":"Glycobiology","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycan; Chemistry; ATP-binding cassette transporter; Computational biology; Transporter; Chain (unit); Diversity (politics); Biochemistry; Glycoprotein; Biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001426672,0.0001657913,0.0009842489,0.00008603307,0.00004073982,0.000007471962,0.0002059197,0.0003552439,0.00006616714],"category_scores_gemma":[0.00002246657,0.00007899467,0.0001311151,0.001050763,0.00005434972,0.00003393094,0.0001386048,0.00008936296,0.000001146635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004317901,"about_ca_system_score_gemma":0.00001396728,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007612089,"about_ca_topic_score_gemma":0.00008420536,"domain_scores_codex":[0.9990416,0.00004339961,0.000496149,0.0002092972,0.00006150921,0.0001480628],"domain_scores_gemma":[0.9993873,0.00006251998,0.0003865586,0.00006345645,0.00005932552,0.00004078618],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.00007252125,0.0002208239,0.01612386,0.007810141,0.001441016,0.000004986548,0.001316138,0.00003311822,0.1226997,0.00007213796,0.00001328418,0.8501922],"study_design_scores_gemma":[0.005855934,0.006289606,0.7538822,0.02282252,0.04999727,0.00007597522,0.004098004,0.006655972,0.009230643,0.0001388502,0.1313432,0.009609795],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9838175,0.01492513,0.000007120043,0.0000170458,0.0001138077,0.0003363265,0.0007477221,0.000008459268,0.00002694031],"genre_scores_gemma":[0.6497949,0.3454524,0.0000647433,0.000008261777,0.00003809359,0.000003149706,0.004626501,0.000001687645,0.00001025003],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8405825,"threshold_uncertainty_score":0.3221309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03321319335604905,"score_gpt":0.2491440212542384,"score_spread":0.2159308278981893,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}